RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ECE2O60344 883 aa14.96□□□□□ -0.01
PRPF40B-212ENST00000551111 GOLGA2Q08379 1002 aa14.96□□□□□ -0.01
PRPF40B-212ENST00000551111 SAPCD2Q86UD0 394 aa14.96□□□□□ -0.01
PRPF40B-212ENST00000551111 USP48Q86UV5 1035 aa14.96□□□□□ -0.01
PRPF40B-212ENST00000551111 ZIC5Q96T25 663 aa14.96□□□□□ -0.01
PRPF40B-212ENST00000551111 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
PRPF40B-212ENST00000551111 TBC1D10BQ4KMP7 808 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-212ENST00000551111 G2E3Q7L622 706 aa14.95□□□□□ -0.02
PRPF40B-212ENST00000551111 METTL22Q9BUU2 404 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-212ENST00000551111 ASTN2O75129 1339 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 CDHR2Q9BYE9 1310 aa14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 PCCAP05165 728 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 IGKV5-2P06315 115 aa14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 RBM26Q5T8P6 1007 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 CCDC191Q8NCU4 936 aa14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 DPF2Q92785 391 aa14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 MAP3K2Q9Y2U5 619 aa14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 CACNA1FO60840 1977 aa14.94□□□□□ -0.02
PRPF40B-212ENST00000551111 H7C1D1 291 aa14.93□□□□□ -0.02
PRPF40B-212ENST00000551111 MAP2K1Q02750 393 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-212ENST00000551111 ZC3H15Q8WU90 426 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-212ENST00000551111 CWC25Q9NXE8 425 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-212ENST00000551111 PI4KAP2A4QPH2 592 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 ADM5C9JUS6 153 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 PDE8AO60658 829 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 UFL1O94874 794 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 CWF19L2Q2TBE0 894 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 CCDC30Q5VVM6 783 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 CDC37L1Q7L3B6 337 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 PI4KAP1Q8N8J0 262 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
PRPF40B-212ENST00000551111 VIL1P09327 827 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-212ENST00000551111 ECE1P42892 770 aa14.91□□□□□ -0.02
PRPF40B-212ENST00000551111 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-212ENST00000551111 WWC1Q8IX03 1113 aa14.91□□□□□ -0.02
PRPF40B-212ENST00000551111 ANKIB1Q9P2G1 1089 aa14.91□□□□□ -0.02
PRPF40B-212ENST00000551111 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 KSR2Q6VAB6 950 aa14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 EYA3Q99504 573 aa14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 ZC3H12CQ9C0D7 883 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 GGA1Q9UJY5 639 aa14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 SCAF8Q9UPN6 1271 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 AKAP11Q9UKA4 1901 aa14.9□□□□□ -0.02
PRPF40B-212ENST00000551111 MAP2K2P36507 400 aa14.89□□□□□ -0.03
PRPF40B-212ENST00000551111 KRT26Q7Z3Y9 468 aa14.89□□□□□ -0.03
PRPF40B-212ENST00000551111 TTLL11Q8NHH1 800 aa14.89□□□□□ -0.03
PRPF40B-212ENST00000551111 GREM2Q9H772 168 aa14.89□□□□□ -0.03
PRPF40B-212ENST00000551111 DDX58O95786 925 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 RPS12P25398 132 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 CTSWP56202 376 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 HUNKP57058 714 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 KIF4BQ2VIQ3 1234 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 ANKRD18AQ8IVF6 992 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 ABHD8Q96I13 439 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 GMLQ99445 158 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 MXD3Q9BW11 206 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 SALL2Q9Y467 1007 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 A0A1B0GUL6 1792 aa14.88□□□□□ -0.03
PRPF40B-212ENST00000551111 NEURL1BA8MQ27 555 aa14.87□□□□□ -0.03
PRPF40B-212ENST00000551111 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
PRPF40B-212ENST00000551111 TXNRD3Q86VQ6 643 aa14.87□□□□□ -0.03
PRPF40B-212ENST00000551111 HHIPL1Q96JK4 782 aa14.87□□□□□ -0.03
PRPF40B-212ENST00000551111 FAM155AB1AL88 458 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 ZNF280AP59817 542 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 CCDC27Q2M243 656 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 RSBN1LQ6PCB5 846 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 UBE3BQ7Z3V4 1068 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 BEGAINQ9BUH8 593 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 GGA3Q9NZ52 723 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 MINPP1Q9UNW1 487 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 XDHP47989 1333 aa14.86□□□□□ -0.03
PRPF40B-212ENST00000551111 G3V3G9 751 aa14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 H7C1W4 665 aa14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 KLRK1P26718 216 aa14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 CASP7P55210 303 aa14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 SCARF1Q14162 830 aa14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 DCAF8Q5TAQ9 597 aa14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 GBA2Q9HCG7 927 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-212ENST00000551111 ATP2B4P23634 1241 aa14.84□□□□□ -0.03
PRPF40B-212ENST00000551111 ANGEL2Q5VTE6 544 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-212ENST00000551111 STK31Q9BXU1 1019 aa14.84□□□□□ -0.03
PRPF40B-212ENST00000551111 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-212ENST00000551111 BSDC1Q9NW68 430 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-212ENST00000551111 SNAP23O00161 211 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 BRPF1P55201 1214 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 GCKRQ14397 625 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 PRAMEF18Q5VWM3 479 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 RGMBQ6NW40 437 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 AGBL3Q8NEM8 1001 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 CDCA5Q96FF9 252 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 FANCIQ9NVI1 1328 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 ZNF609O15014 1411 aa14.83□□□□□ -0.04
PRPF40B-212ENST00000551111 USP17L3A6NCW0 530 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 USP17L4A6NCW7 530 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 VAMP4O75379 141 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 CCT4P50991 539 aaKnown RBP14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 NEXNQ0ZGT2 675 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms