RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 EYA3Q99504 573 aa18.39■□□□□ 0.53
TROAP-203ENST00000546735 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
TROAP-203ENST00000546735 UFL1O94874 794 aa18.38■□□□□ 0.53
TROAP-203ENST00000546735 SLC4A2P04920 1241 aa18.38■□□□□ 0.53
TROAP-203ENST00000546735 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
TROAP-203ENST00000546735 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
TROAP-203ENST00000546735 IL16Q14005 1332 aa18.38■□□□□ 0.53
TROAP-203ENST00000546735 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
TROAP-203ENST00000546735 RTL9Q8NET4 1388 aa18.38■□□□□ 0.53
TROAP-203ENST00000546735 H7C1D1 291 aa18.37■□□□□ 0.53
TROAP-203ENST00000546735 GRM1Q13255 1194 aa18.37■□□□□ 0.53
TROAP-203ENST00000546735 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
TROAP-203ENST00000546735 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
TROAP-203ENST00000546735 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
TROAP-203ENST00000546735 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
TROAP-203ENST00000546735 NEURL1BA8MQ27 555 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 CELF2O95319 508 aaKnown RBP18.36■□□□□ 0.53
TROAP-203ENST00000546735 EGFRP00533 1210 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 CTSWP56202 376 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 NEXNQ0ZGT2 675 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 TBC1D10BQ4KMP7 808 aaPredicted RBP18.36■□□□□ 0.53
TROAP-203ENST00000546735 CYP4F22Q6NT55 531 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 DLK2Q6UY11 383 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 ANKRD18AQ8IVF6 992 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 GGA1Q9UJY5 639 aa18.36■□□□□ 0.53
TROAP-203ENST00000546735 RBM26Q5T8P6 1007 aaKnown RBP18.35■□□□□ 0.53
TROAP-203ENST00000546735 DPF2Q92785 391 aa18.35■□□□□ 0.53
TROAP-203ENST00000546735 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
TROAP-203ENST00000546735 GREM2Q9H772 168 aa18.35■□□□□ 0.53
TROAP-203ENST00000546735 ZNF408Q9H9D4 720 aa18.35■□□□□ 0.53
TROAP-203ENST00000546735 TLL2Q9Y6L7 1015 aa18.35■□□□□ 0.53
TROAP-203ENST00000546735 WTIPA6NIX2 430 aaPredicted RBP18.34■□□□□ 0.53
TROAP-203ENST00000546735 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
TROAP-203ENST00000546735 FLIIQ13045 1269 aa18.34■□□□□ 0.53
TROAP-203ENST00000546735 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
TROAP-203ENST00000546735 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
TROAP-203ENST00000546735 ZC3H15Q8WU90 426 aaKnown RBP18.34■□□□□ 0.53
TROAP-203ENST00000546735 CAPNS2Q96L46 248 aa18.34■□□□□ 0.53
TROAP-203ENST00000546735 XDHP47989 1333 aa18.33■□□□□ 0.53
TROAP-203ENST00000546735 G3V3G9 751 aa18.33■□□□□ 0.52
TROAP-203ENST00000546735 VAMP4O75379 141 aa18.33■□□□□ 0.52
TROAP-203ENST00000546735 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
TROAP-203ENST00000546735 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.52
TROAP-203ENST00000546735 UBE3BQ7Z3V4 1068 aa18.33■□□□□ 0.52
TROAP-203ENST00000546735 USP48Q86UV5 1035 aa18.33■□□□□ 0.52
TROAP-203ENST00000546735 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
TROAP-203ENST00000546735 H7C1W4 665 aa18.32■□□□□ 0.52
TROAP-203ENST00000546735 CTCFP49711 727 aaPredicted RBP18.32■□□□□ 0.52
TROAP-203ENST00000546735 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
TROAP-203ENST00000546735 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
TROAP-203ENST00000546735 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
TROAP-203ENST00000546735 CDC5LQ99459 802 aaKnown RBP18.32■□□□□ 0.52
TROAP-203ENST00000546735 VIL1P09327 827 aaKnown RBP18.31■□□□□ 0.52
TROAP-203ENST00000546735 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
TROAP-203ENST00000546735 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
TROAP-203ENST00000546735 LBX1P52954 281 aa18.31■□□□□ 0.52
TROAP-203ENST00000546735 SAPCD2Q86UD0 394 aa18.31■□□□□ 0.52
TROAP-203ENST00000546735 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
TROAP-203ENST00000546735 AOC2O75106 756 aa18.3■□□□□ 0.52
TROAP-203ENST00000546735 ECE1P42892 770 aa18.3■□□□□ 0.52
TROAP-203ENST00000546735 GCKRQ14397 625 aa18.3■□□□□ 0.52
TROAP-203ENST00000546735 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
TROAP-203ENST00000546735 TRPM7Q96QT4 1865 aa18.3■□□□□ 0.52
TROAP-203ENST00000546735 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
TROAP-203ENST00000546735 ASTN2O75129 1339 aaPredicted RBP18.29■□□□□ 0.52
TROAP-203ENST00000546735 ADM5C9JUS6 153 aa18.29■□□□□ 0.52
TROAP-203ENST00000546735 HSPA8P11142 646 aaKnown RBP18.29■□□□□ 0.52
TROAP-203ENST00000546735 CASP7P55210 303 aa18.29■□□□□ 0.52
TROAP-203ENST00000546735 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
TROAP-203ENST00000546735 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
TROAP-203ENST00000546735 PRDM10Q9NQV6 1147 aa18.29■□□□□ 0.52
TROAP-203ENST00000546735 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
TROAP-203ENST00000546735 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
TROAP-203ENST00000546735 KRT26Q7Z3Y9 468 aa18.28■□□□□ 0.52
TROAP-203ENST00000546735 F6X3S4 739 aa18.27■□□□□ 0.52
TROAP-203ENST00000546735 ITGA6P23229 1130 aa18.27■□□□□ 0.52
TROAP-203ENST00000546735 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
TROAP-203ENST00000546735 LINS1Q8NG48 757 aa18.27■□□□□ 0.52
TROAP-203ENST00000546735 DCPSQ96C86 337 aaKnown RBP18.27■□□□□ 0.52
TROAP-203ENST00000546735 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
TROAP-203ENST00000546735 IGHMBP2P38935 993 aaKnown RBP18.26■□□□□ 0.51
TROAP-203ENST00000546735 CCT4P50991 539 aaKnown RBP18.26■□□□□ 0.51
TROAP-203ENST00000546735 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
TROAP-203ENST00000546735 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
TROAP-203ENST00000546735 THSD7BQ9C0I4 1608 aa18.26■□□□□ 0.51
TROAP-203ENST00000546735 PODNQ7Z5L7 613 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 AGBL3Q8NEM8 1001 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 MXD3Q9BW11 206 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 TSKSQ9UJT2 592 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 SPEF2Q9C093 1822 aa18.25■□□□□ 0.51
TROAP-203ENST00000546735 USP17L3A6NCW0 530 aa18.24■□□□□ 0.51
TROAP-203ENST00000546735 USP17L4A6NCW7 530 aa18.24■□□□□ 0.51
TROAP-203ENST00000546735 CSF1RP07333 972 aa18.24■□□□□ 0.51
TROAP-203ENST00000546735 KLRK1P26718 216 aa18.24■□□□□ 0.51
TROAP-203ENST00000546735 HUNKP57058 714 aa18.24■□□□□ 0.51
TROAP-203ENST00000546735 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
TROAP-203ENST00000546735 USP17L1Q7RTZ2 530 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms