RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 GTF3C6Q969F1 213 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 ITGB4P16144 1822 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 ELP1O95163 1332 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 DISP2A7MBM2 1401 aa21.05■□□□□ 0.96
SCARB1-208ENST00000544327 LAMA4Q16363 1823 aa21.05■□□□□ 0.96
SCARB1-208ENST00000544327 GOLIM4O00461 696 aa21.05■□□□□ 0.96
SCARB1-208ENST00000544327 TIMM10P62072 90 aa21.05■□□□□ 0.96
SCARB1-208ENST00000544327 TCEANC2Q96MN5 208 aa21.05■□□□□ 0.96
SCARB1-208ENST00000544327 PLCH1Q4KWH8 1693 aa21.04■□□□□ 0.96
SCARB1-208ENST00000544327 A0A1B0GUL7 405 aa21.04■□□□□ 0.96
SCARB1-208ENST00000544327 CHGBP05060 677 aa21.04■□□□□ 0.96
SCARB1-208ENST00000544327 CSF1RP07333 972 aa21.04■□□□□ 0.96
SCARB1-208ENST00000544327 KRT85P78386 507 aa21.04■□□□□ 0.96
SCARB1-208ENST00000544327 KIF6Q6ZMV9 814 aa21.04■□□□□ 0.96
SCARB1-208ENST00000544327 ZNF594Q96JF6 807 aaPredicted RBP21.04■□□□□ 0.96
SCARB1-208ENST00000544327 ABCC12Q96J65 1359 aa21.03■□□□□ 0.96
SCARB1-208ENST00000544327 COL14A1Q05707 1796 aaKnown RBP21.03■□□□□ 0.96
SCARB1-208ENST00000544327 IFIT1P09914 478 aaKnown RBP21.03■□□□□ 0.96
SCARB1-208ENST00000544327 CDC37L1Q7L3B6 337 aa21.03■□□□□ 0.96
SCARB1-208ENST00000544327 PIGBQ92521 554 aa21.03■□□□□ 0.96
SCARB1-208ENST00000544327 CEP126Q9P2H0 1117 aa21.03■□□□□ 0.96
SCARB1-208ENST00000544327 NOL7Q9UMY1 257 aaKnown RBP21.03■□□□□ 0.96
SCARB1-208ENST00000544327 AKAP2Q9Y2D5 859 aa21.03■□□□□ 0.96
SCARB1-208ENST00000544327 RNF113AO15541 343 aaKnown RBP21.02■□□□□ 0.96
SCARB1-208ENST00000544327 CCDC57Q2TAC2 916 aa21.02■□□□□ 0.96
SCARB1-208ENST00000544327 Q6ZUG5 572 aa21.02■□□□□ 0.96
SCARB1-208ENST00000544327 DNAJC10Q8IXB1 793 aa21.02■□□□□ 0.96
SCARB1-208ENST00000544327 ZBTB38Q8NAP3 1195 aaPredicted RBP21.02■□□□□ 0.96
SCARB1-208ENST00000544327 CDHR2Q9BYE9 1310 aa21.02■□□□□ 0.96
SCARB1-208ENST00000544327 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.02■□□□□ 0.96
SCARB1-208ENST00000544327 ANKRD36CQ5JPF3 1778 aa21.02■□□□□ 0.95
SCARB1-208ENST00000544327 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.95
SCARB1-208ENST00000544327 STARD3NLO95772 234 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 LLPHQ9BRT6 129 aaKnown RBP21.01■□□□□ 0.95
SCARB1-208ENST00000544327 PUS3Q9BZE2 481 aaKnown RBP21.01■□□□□ 0.95
SCARB1-208ENST00000544327 MCM5P33992 734 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 LRRFIP1Q32MZ4 808 aaKnown RBP21.01■□□□□ 0.95
SCARB1-208ENST00000544327 STOX1Q6ZVD7 989 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 DHX32Q7L7V1 743 aaKnown RBP21.01■□□□□ 0.95
SCARB1-208ENST00000544327 RNF214Q8ND24 703 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 FUCA2Q9BTY2 467 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 AGXT2Q9BYV1 514 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
SCARB1-208ENST00000544327 MAST3O60307 1309 aa21■□□□□ 0.95
SCARB1-208ENST00000544327 PFKFB2O60825 505 aa20.99■□□□□ 0.95
SCARB1-208ENST00000544327 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
SCARB1-208ENST00000544327 GIGYF2Q6Y7W6 1299 aaKnown RBP20.99■□□□□ 0.95
SCARB1-208ENST00000544327 SMARCC2Q8TAQ2 1214 aa20.99■□□□□ 0.95
SCARB1-208ENST00000544327 CCDC39Q9UFE4 941 aa20.99■□□□□ 0.95
SCARB1-208ENST00000544327 BCL9O00512 1426 aa20.99■□□□□ 0.95
SCARB1-208ENST00000544327 HSPD1P10809 573 aaKnown RBP20.99■□□□□ 0.95
SCARB1-208ENST00000544327 MSNP26038 577 aaKnown RBP20.99■□□□□ 0.95
SCARB1-208ENST00000544327 TTC6Q86TZ1 520 aa20.99■□□□□ 0.95
SCARB1-208ENST00000544327 SCAND2PQ9GZW5 306 aaPredicted RBP20.99■□□□□ 0.95
SCARB1-208ENST00000544327 ZFYP08048 801 aaPredicted RBP20.98■□□□□ 0.95
SCARB1-208ENST00000544327 HSP90AB3PQ58FF7 597 aa20.98■□□□□ 0.95
SCARB1-208ENST00000544327 CCDC158Q5M9N0 1113 aa20.98■□□□□ 0.95
SCARB1-208ENST00000544327 ANO8Q9HCE9 1232 aaPredicted RBP20.98■□□□□ 0.95
SCARB1-208ENST00000544327 WNK3Q9BYP7 1800 aa20.98■□□□□ 0.95
SCARB1-208ENST00000544327 ZNF500O60304 480 aaPredicted RBP20.97■□□□□ 0.95
SCARB1-208ENST00000544327 DTNBO60941 627 aa20.97■□□□□ 0.95
SCARB1-208ENST00000544327 STK3Q13188 491 aa20.97■□□□□ 0.95
SCARB1-208ENST00000544327 FBXL16Q8N461 479 aa20.97■□□□□ 0.95
SCARB1-208ENST00000544327 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.97■□□□□ 0.95
SCARB1-208ENST00000544327 CCDC9Q9Y3X0 531 aaKnown RBP20.97■□□□□ 0.95
SCARB1-208ENST00000544327 RIC1Q4ADV7 1423 aa20.97■□□□□ 0.95
SCARB1-208ENST00000544327 COL22A1Q8NFW1 1626 aaPredicted RBP20.97■□□□□ 0.95
SCARB1-208ENST00000544327 IFIT5Q13325 482 aaKnown RBP20.97■□□□□ 0.95
SCARB1-208ENST00000544327 XAGE2Q96GT9 111 aa20.97■□□□□ 0.95
SCARB1-208ENST00000544327 TTC39AQ5SRH9 613 aa20.96■□□□□ 0.95
SCARB1-208ENST00000544327 BRF1Q92994 677 aa20.96■□□□□ 0.95
SCARB1-208ENST00000544327 BTG4Q9NY30 223 aa20.96■□□□□ 0.95
SCARB1-208ENST00000544327 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.96■□□□□ 0.95
SCARB1-208ENST00000544327 ZKSCAN5Q9Y2L8 839 aa20.96■□□□□ 0.95
SCARB1-208ENST00000544327 MYH3P11055 1940 aa20.95■□□□□ 0.94
SCARB1-208ENST00000544327 M0R2C6 588 aa20.95■□□□□ 0.94
SCARB1-208ENST00000544327 JAK2O60674 1132 aa20.95■□□□□ 0.94
SCARB1-208ENST00000544327 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
SCARB1-208ENST00000544327 SCRN1Q12765 414 aa20.95■□□□□ 0.94
SCARB1-208ENST00000544327 RESTQ13127 1097 aa20.95■□□□□ 0.94
SCARB1-208ENST00000544327 FAM89AQ96GI7 184 aa20.95■□□□□ 0.94
SCARB1-208ENST00000544327 E7EWF7 191 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 ADORA1P30542 326 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 SLFNL1Q499Z3 407 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 FERMT3Q86UX7 667 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 NLRP10Q86W26 655 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 CHMP4CQ96CF2 233 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 ZSCAN16Q9H4T2 348 aaPredicted RBP20.94■□□□□ 0.94
SCARB1-208ENST00000544327 MYH7P12883 1935 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 KDM4FA0A1W2PPD8 638 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
SCARB1-208ENST00000544327 HMGN5P82970 282 aaKnown RBP20.94■□□□□ 0.94
SCARB1-208ENST00000544327 RIPOR2Q9Y4F9 1068 aa20.94■□□□□ 0.94
SCARB1-208ENST00000544327 NWD2Q9ULI1 1742 aa20.93■□□□□ 0.94
SCARB1-208ENST00000544327 MYH15Q9Y2K3 1946 aa20.93■□□□□ 0.94
SCARB1-208ENST00000544327 TAF7LQ5H9L4 462 aa20.93■□□□□ 0.94
SCARB1-208ENST00000544327 NAA16Q6N069 864 aaPredicted RBP20.93■□□□□ 0.94
SCARB1-208ENST00000544327 NSUN7Q8NE18 718 aaKnown RBP20.93■□□□□ 0.94
SCARB1-208ENST00000544327 LEO1Q8WVC0 666 aaPredicted RBP20.93■□□□□ 0.94
SCARB1-208ENST00000544327 OSBP2Q969R2 916 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms