RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
SCARB1-207ENST00000541661 MLLT1Q03111 559 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-207ENST00000541661 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCARB1-207ENST00000541661 DOK7Q18PE1 504 aa17.01■□□□□ 0.31
SCARB1-207ENST00000541661 ZIC5Q96T25 663 aa17.01■□□□□ 0.31
SCARB1-207ENST00000541661 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
SCARB1-207ENST00000541661 ZNF853P0CG23 659 aa17■□□□□ 0.31
SCARB1-207ENST00000541661 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
SCARB1-207ENST00000541661 RGMBQ6NW40 437 aa17■□□□□ 0.31
SCARB1-207ENST00000541661 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
SCARB1-207ENST00000541661 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
SCARB1-207ENST00000541661 DCPSQ96C86 337 aaKnown RBP17■□□□□ 0.31
SCARB1-207ENST00000541661 ZC3H12CQ9C0D7 883 aaKnown RBP17■□□□□ 0.31
SCARB1-207ENST00000541661 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
SCARB1-207ENST00000541661 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
SCARB1-207ENST00000541661 ZNF609O15014 1411 aa16.99■□□□□ 0.31
SCARB1-207ENST00000541661 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
SCARB1-207ENST00000541661 CCDC102AQ96A19 550 aa16.99■□□□□ 0.31
SCARB1-207ENST00000541661 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
SCARB1-207ENST00000541661 PSME4Q14997 1843 aa16.98■□□□□ 0.31
SCARB1-207ENST00000541661 ADM5C9JUS6 153 aa16.98■□□□□ 0.31
SCARB1-207ENST00000541661 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
SCARB1-207ENST00000541661 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
SCARB1-207ENST00000541661 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
SCARB1-207ENST00000541661 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
SCARB1-207ENST00000541661 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
SCARB1-207ENST00000541661 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
SCARB1-207ENST00000541661 DGKZQ13574 1117 aa16.97■□□□□ 0.31
SCARB1-207ENST00000541661 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
SCARB1-207ENST00000541661 PHAXQ9H814 394 aaKnown RBP16.97■□□□□ 0.31
SCARB1-207ENST00000541661 SAGE1Q9NXZ1 904 aa16.97■□□□□ 0.31
SCARB1-207ENST00000541661 SLC34A2O95436 690 aa16.96■□□□□ 0.31
SCARB1-207ENST00000541661 PCCAP05165 728 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-207ENST00000541661 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-207ENST00000541661 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
SCARB1-207ENST00000541661 ANKIB1Q9P2G1 1089 aa16.96■□□□□ 0.31
SCARB1-207ENST00000541661 GGA1Q9UJY5 639 aa16.96■□□□□ 0.31
SCARB1-207ENST00000541661 AKAP11Q9UKA4 1901 aa16.96■□□□□ 0.3
SCARB1-207ENST00000541661 PDE8AO60658 829 aa16.95■□□□□ 0.3
SCARB1-207ENST00000541661 UFL1O94874 794 aa16.95■□□□□ 0.3
SCARB1-207ENST00000541661 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-207ENST00000541661 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-207ENST00000541661 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
SCARB1-207ENST00000541661 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
SCARB1-207ENST00000541661 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
SCARB1-207ENST00000541661 GGA3Q9NZ52 723 aa16.95■□□□□ 0.3
SCARB1-207ENST00000541661 G3V3G9 751 aa16.94■□□□□ 0.3
SCARB1-207ENST00000541661 SLC10A3P09131 477 aa16.94■□□□□ 0.3
SCARB1-207ENST00000541661 GNAI1P63096 354 aa16.94■□□□□ 0.3
SCARB1-207ENST00000541661 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
SCARB1-207ENST00000541661 RSBN1LQ6PCB5 846 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-207ENST00000541661 GMLQ99445 158 aa16.94■□□□□ 0.3
SCARB1-207ENST00000541661 MYD88Q99836 296 aa16.94■□□□□ 0.3
SCARB1-207ENST00000541661 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
SCARB1-207ENST00000541661 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
SCARB1-207ENST00000541661 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-207ENST00000541661 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-207ENST00000541661 RNF186Q9NXI6 227 aa16.93■□□□□ 0.3
SCARB1-207ENST00000541661 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-207ENST00000541661 XDHP47989 1333 aa16.93■□□□□ 0.3
SCARB1-207ENST00000541661 SCARF1Q14162 830 aa16.92■□□□□ 0.3
SCARB1-207ENST00000541661 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-207ENST00000541661 CSRNP1Q96S65 589 aa16.92■□□□□ 0.3
SCARB1-207ENST00000541661 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
SCARB1-207ENST00000541661 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
SCARB1-207ENST00000541661 TNRC18O15417 2968 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-207ENST00000541661 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
SCARB1-207ENST00000541661 TRPA1O75762 1119 aa16.91■□□□□ 0.3
SCARB1-207ENST00000541661 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
SCARB1-207ENST00000541661 FKBP1BP68106 108 aa16.91■□□□□ 0.3
SCARB1-207ENST00000541661 ANGEL2Q5VTE6 544 aaKnown RBP16.91■□□□□ 0.3
SCARB1-207ENST00000541661 PODNQ7Z5L7 613 aa16.91■□□□□ 0.3
SCARB1-207ENST00000541661 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
SCARB1-207ENST00000541661 APAF1O14727 1248 aa16.9■□□□□ 0.3
SCARB1-207ENST00000541661 DDX58O95786 925 aaKnown RBP16.9■□□□□ 0.3
SCARB1-207ENST00000541661 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
SCARB1-207ENST00000541661 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
SCARB1-207ENST00000541661 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-207ENST00000541661 MYOZ2Q9NPC6 264 aa16.9■□□□□ 0.3
SCARB1-207ENST00000541661 PAPPA2Q9BXP8 1791 aa16.89■□□□□ 0.3
SCARB1-207ENST00000541661 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
SCARB1-207ENST00000541661 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
SCARB1-207ENST00000541661 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
SCARB1-207ENST00000541661 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
SCARB1-207ENST00000541661 RASAL3Q86YV0 1011 aa16.89■□□□□ 0.29
SCARB1-207ENST00000541661 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-207ENST00000541661 MYH3P11055 1940 aa16.89■□□□□ 0.29
SCARB1-207ENST00000541661 ZNF646O15015 1829 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-207ENST00000541661 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-207ENST00000541661 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
SCARB1-207ENST00000541661 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-207ENST00000541661 MED23Q9ULK4 1368 aa16.88■□□□□ 0.29
SCARB1-207ENST00000541661 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
SCARB1-207ENST00000541661 CTSWP56202 376 aa16.87■□□□□ 0.29
SCARB1-207ENST00000541661 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
SCARB1-207ENST00000541661 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
SCARB1-207ENST00000541661 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
SCARB1-207ENST00000541661 MAP3K2Q9Y2U5 619 aa16.87■□□□□ 0.29
SCARB1-207ENST00000541661 WTIPA6NIX2 430 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-207ENST00000541661 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms