RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
PFDN1-207ENST00000524074 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
PFDN1-207ENST00000524074 POLR3GLQ9BT43 218 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 MARCH6O60337 910 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 EDN3P14138 238 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 VEGFBP49765 207 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
PFDN1-207ENST00000524074 CEP63Q96MT8 703 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 ZIC5Q96T25 663 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 OXCT2Q9BYC2 517 aaPredicted RBP12.37□□□□□ -0.43
PFDN1-207ENST00000524074 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
PFDN1-207ENST00000524074 A0A1W2PP55 124 aa12.36□□□□□ -0.43
PFDN1-207ENST00000524074 SOX9P48436 509 aa12.36□□□□□ -0.43
PFDN1-207ENST00000524074 TYRO3Q06418 890 aa12.36□□□□□ -0.43
PFDN1-207ENST00000524074 TSEN34Q9BSV6 310 aaKnown RBP12.36□□□□□ -0.43
PFDN1-207ENST00000524074 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
PFDN1-207ENST00000524074 BRINP2Q9C0B6 783 aa12.36□□□□□ -0.43
PFDN1-207ENST00000524074 AKAP2Q9Y2D5 859 aa12.36□□□□□ -0.43
PFDN1-207ENST00000524074 EGFRP00533 1210 aa12.35□□□□□ -0.43
PFDN1-207ENST00000524074 FOXC1Q12948 553 aa12.35□□□□□ -0.43
PFDN1-207ENST00000524074 RAB33AQ14088 237 aa12.35□□□□□ -0.43
PFDN1-207ENST00000524074 MAP3K11Q16584 847 aa12.35□□□□□ -0.43
PFDN1-207ENST00000524074 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
PFDN1-207ENST00000524074 HNRNPLLQ8WVV9 542 aaKnown RBP12.35□□□□□ -0.43
PFDN1-207ENST00000524074 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
PFDN1-207ENST00000524074 SUPT16HQ9Y5B9 1047 aaKnown RBP12.35□□□□□ -0.43
PFDN1-207ENST00000524074 KLF4O43474 513 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 GRNP28799 593 aaKnown RBP12.34□□□□□ -0.43
PFDN1-207ENST00000524074 POU4F2Q12837 409 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
PFDN1-207ENST00000524074 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 DEPDC7Q96QD5 511 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 SNTG2Q9NY99 539 aa12.34□□□□□ -0.43
PFDN1-207ENST00000524074 MAP3K10Q02779 954 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 ANAPC16Q96DE5 110 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 C11orf16Q9NQ32 467 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 LATS2Q9NRM7 1088 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.44
PFDN1-207ENST00000524074 SPINT1O43278 529 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 FBXO24O75426 580 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 CTC1Q2NKJ3 1217 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 FBXL19Q6PCT2 694 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 RHOVQ96L33 236 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
PFDN1-207ENST00000524074 METTL14Q9HCE5 456 aaKnown RBP12.32□□□□□ -0.44
PFDN1-207ENST00000524074 PRKAG3Q9UGI9 489 aa12.32□□□□□ -0.44
PFDN1-207ENST00000524074 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 A0A1W2PNR3 127 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 TTC24A2A3L6 582 aaPredicted RBP12.31□□□□□ -0.44
PFDN1-207ENST00000524074 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 SNAP47Q5SQN1 464 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 PRICKLE2Q7Z3G6 844 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 COL4A3BPQ9Y5P4 624 aa12.31□□□□□ -0.44
PFDN1-207ENST00000524074 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 J3QL48 77 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 UPP2O95045 317 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 MSX1P28360 303 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 CTSOP43234 321 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-207ENST00000524074 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 LRP10Q7Z4F1 713 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 PHC3Q8NDX5 983 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 LIN7BQ9HAP6 207 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 ABCB6Q9NP58 842 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 BRD7Q9NPI1 651 aa12.3□□□□□ -0.44
PFDN1-207ENST00000524074 CCDC85CA6NKD9 419 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-207ENST00000524074 LIG3P49916 1009 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 RASA3Q14644 834 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-207ENST00000524074 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 SRRTQ9BXP5 876 aaKnown RBP12.29□□□□□ -0.44
PFDN1-207ENST00000524074 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-207ENST00000524074 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 UBP1Q9NZI7 540 aa12.29□□□□□ -0.44
PFDN1-207ENST00000524074 PLEKHG4Q58EX7 1191 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 TNNI3KQ59H18 835 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 NKD1Q969G9 470 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 ZFYVE1Q9HBF4 777 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 PKD2L1Q9P0L9 805 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 TLR6Q9Y2C9 796 aa12.28□□□□□ -0.44
PFDN1-207ENST00000524074 PPP1R12AO14974 1030 aaPredicted RBP12.27□□□□□ -0.45
PFDN1-207ENST00000524074 GREM1O60565 184 aa12.27□□□□□ -0.45
PFDN1-207ENST00000524074 DNAJC6O75061 913 aa12.27□□□□□ -0.45
PFDN1-207ENST00000524074 PF4P02776 101 aa12.27□□□□□ -0.45
PFDN1-207ENST00000524074 LYSMD3Q7Z3D4 306 aa12.27□□□□□ -0.45
PFDN1-207ENST00000524074 ZNF598Q86UK7 904 aaKnown RBP12.27□□□□□ -0.45
PFDN1-207ENST00000524074 GOLM1Q8NBJ4 401 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms