RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 KRT222Q8N1A0 295 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 SYT1P21579 422 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 IL2RBP14784 551 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 LTKP29376 864 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 GPATCH11Q8N954 259 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 DBNDD2Q9BQY9 259 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
PRDM16-206ENST00000511072 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
PRDM16-206ENST00000511072 FAM193AP78312 1265 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 ZNF287Q9HBT7 754 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 CTAGE5O15320 804 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 KCNQ3O43525 872 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 KIAA1328Q86T90 577 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 GPT2Q8TD30 523 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 DNAJC25Q9H1X3 360 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 CENPHQ9H3R5 247 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 ZMYM4Q5VZL5 1548 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 SLC4A4Q9Y6R1 1079 aa16.41■□□□□ 0.22
PRDM16-206ENST00000511072 WTAPQ15007 396 aa16.4■□□□□ 0.22
PRDM16-206ENST00000511072 ANO6Q4KMQ2 910 aa16.4■□□□□ 0.22
PRDM16-206ENST00000511072 ZNF594Q96JF6 807 aaPredicted RBP16.4■□□□□ 0.22
PRDM16-206ENST00000511072 PRC1O43663 620 aa16.4■□□□□ 0.22
PRDM16-206ENST00000511072 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
PRDM16-206ENST00000511072 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
PRDM16-206ENST00000511072 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
PRDM16-206ENST00000511072 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
PRDM16-206ENST00000511072 DDB1Q16531 1140 aa16.4■□□□□ 0.22
PRDM16-206ENST00000511072 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
PRDM16-206ENST00000511072 EDC3Q96F86 508 aaKnown RBP16.4■□□□□ 0.22
PRDM16-206ENST00000511072 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.22
PRDM16-206ENST00000511072 CCDC186Q7Z3E2 898 aa16.39■□□□□ 0.22
PRDM16-206ENST00000511072 RFC4P35249 363 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 UBA7P41226 1012 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 BLMP54132 1417 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 SYKP43405 635 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 AFMP43652 599 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 GABPB1Q06547 395 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 KIF4BQ2VIQ3 1234 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 ERCC4Q92889 916 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 ZFYVE9O95405 1425 aa16.39■□□□□ 0.21
PRDM16-206ENST00000511072 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-206ENST00000511072 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
PRDM16-206ENST00000511072 STX1AQ16623 288 aa16.38■□□□□ 0.21
PRDM16-206ENST00000511072 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
PRDM16-206ENST00000511072 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
PRDM16-206ENST00000511072 CCDC171Q6TFL3 1326 aa16.37■□□□□ 0.21
PRDM16-206ENST00000511072 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
PRDM16-206ENST00000511072 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
PRDM16-206ENST00000511072 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
PRDM16-206ENST00000511072 MAGI2Q86UL8 1455 aa16.37■□□□□ 0.21
PRDM16-206ENST00000511072 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
PRDM16-206ENST00000511072 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
PRDM16-206ENST00000511072 NSFL1CQ9UNZ2 370 aaKnown RBP16.37■□□□□ 0.21
PRDM16-206ENST00000511072 ZKSCAN3Q9BRR0 538 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
PRDM16-206ENST00000511072 PDE4BQ07343 736 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 GTF2A1P52655 376 aaPredicted RBP16.36■□□□□ 0.21
PRDM16-206ENST00000511072 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
PRDM16-206ENST00000511072 BTG4Q9NY30 223 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 CDR1P51861 262 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 C10orf67Q8IYJ2 551 aa16.36■□□□□ 0.21
PRDM16-206ENST00000511072 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
PRDM16-206ENST00000511072 PTPDC1A2A3K4 754 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 RTN1Q16799 776 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 NAA16Q6N069 864 aaPredicted RBP16.35■□□□□ 0.21
PRDM16-206ENST00000511072 FAM200AQ8TCP9 573 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 CCDC102AQ96A19 550 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 SETDB2Q96T68 719 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 NCOA5Q9HCD5 579 aaKnown RBP16.35■□□□□ 0.21
PRDM16-206ENST00000511072 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
PRDM16-206ENST00000511072 H0YHG0 523 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
PRDM16-206ENST00000511072 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
PRDM16-206ENST00000511072 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
PRDM16-206ENST00000511072 BAG3O95817 575 aa16.34■□□□□ 0.21
PRDM16-206ENST00000511072 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
PRDM16-206ENST00000511072 CACNA2D4Q7Z3S7 1137 aa16.34■□□□□ 0.21
PRDM16-206ENST00000511072 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
PRDM16-206ENST00000511072 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
PRDM16-206ENST00000511072 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
PRDM16-206ENST00000511072 MAGEB6Q8N7X4 407 aa16.34■□□□□ 0.21
PRDM16-206ENST00000511072 MRPS27Q92552 414 aaKnown RBP16.34■□□□□ 0.21
PRDM16-206ENST00000511072 ESR2Q92731 530 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms