RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
LINC00461-201ENST00000500197 CHD4Q14839 1912 aa11.78□□□□□ -0.52
LINC00461-201ENST00000500197 PDCP20941 246 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 ME3Q16798 604 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 AKAP2Q9Y2D5 859 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 LY75O60449 1722 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 LARGE1O95461 756 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
LINC00461-201ENST00000500197 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
LINC00461-201ENST00000500197 UBE2HP62256 183 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 PIGBQ92521 554 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 PANK2Q9BZ23 570 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
LINC00461-201ENST00000500197 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
LINC00461-201ENST00000500197 EXOSC10Q01780 885 aaKnown RBP11.76□□□□□ -0.53
LINC00461-201ENST00000500197 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
LINC00461-201ENST00000500197 NID2Q14112 1375 aa11.76□□□□□ -0.53
LINC00461-201ENST00000500197 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
LINC00461-201ENST00000500197 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
LINC00461-201ENST00000500197 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
LINC00461-201ENST00000500197 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
LINC00461-201ENST00000500197 STARD3NLO95772 234 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 A1BGP04217 495 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 SMC3Q9UQE7 1217 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 NASPP49321 788 aaPredicted RBP11.75□□□□□ -0.53
LINC00461-201ENST00000500197 RBM43Q6ZSC3 357 aaKnown RBP11.75□□□□□ -0.53
LINC00461-201ENST00000500197 MCM5P33992 734 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 RIPOR2Q9Y4F9 1068 aa11.75□□□□□ -0.53
LINC00461-201ENST00000500197 PFKFB2O60825 505 aa11.74□□□□□ -0.53
LINC00461-201ENST00000500197 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
LINC00461-201ENST00000500197 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
LINC00461-201ENST00000500197 GJB2P29033 226 aa11.74□□□□□ -0.53
LINC00461-201ENST00000500197 CCDC183Q5T5S1 534 aa11.74□□□□□ -0.53
LINC00461-201ENST00000500197 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
LINC00461-201ENST00000500197 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
LINC00461-201ENST00000500197 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
LINC00461-201ENST00000500197 ATP5J2-PTCD1G3V325 749 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
LINC00461-201ENST00000500197 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 MYH14Q7Z406 1995 aaKnown RBP11.73□□□□□ -0.53
LINC00461-201ENST00000500197 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 SIL1Q9H173 461 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 RRAGDQ9NQL2 400 aaPredicted RBP11.73□□□□□ -0.53
LINC00461-201ENST00000500197 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
LINC00461-201ENST00000500197 ARID4AP29374 1257 aaPredicted RBP11.73□□□□□ -0.53
LINC00461-201ENST00000500197 NEK1Q96PY6 1258 aa11.73□□□□□ -0.53
LINC00461-201ENST00000500197 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
LINC00461-201ENST00000500197 CYP21A2P08686 494 aa11.72□□□□□ -0.53
LINC00461-201ENST00000500197 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
LINC00461-201ENST00000500197 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
LINC00461-201ENST00000500197 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
LINC00461-201ENST00000500197 A0A1B0GUL7 405 aa11.72□□□□□ -0.53
LINC00461-201ENST00000500197 FOXP2O15409 715 aa11.72□□□□□ -0.53
LINC00461-201ENST00000500197 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
LINC00461-201ENST00000500197 MAST3O60307 1309 aa11.72□□□□□ -0.53
LINC00461-201ENST00000500197 FGFR2P21802 821 aa11.71□□□□□ -0.53
LINC00461-201ENST00000500197 DHX32Q7L7V1 743 aaKnown RBP11.71□□□□□ -0.53
LINC00461-201ENST00000500197 DUOX1Q9NRD9 1551 aa11.71□□□□□ -0.53
LINC00461-201ENST00000500197 LAMB1P07942 1786 aa11.71□□□□□ -0.53
LINC00461-201ENST00000500197 CTSWP56202 376 aa11.71□□□□□ -0.54
LINC00461-201ENST00000500197 IGSF3O75054 1194 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
LINC00461-201ENST00000500197 EVA1CP58658 441 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 LRRC24Q50LG9 513 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 STOX1Q6ZVD7 989 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
LINC00461-201ENST00000500197 TERF1P54274 439 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 ALX1Q15699 326 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 CCDC83Q8IWF9 413 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 ASAP1Q9ULH1 1129 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 TAF6LQ9Y6J9 622 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 HSPD1P10809 573 aaKnown RBP11.7□□□□□ -0.54
LINC00461-201ENST00000500197 TSPY26PQ9H489 355 aa11.7□□□□□ -0.54
LINC00461-201ENST00000500197 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 ESPNB1AK53 854 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
LINC00461-201ENST00000500197 RESTQ13127 1097 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
LINC00461-201ENST00000500197 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 CEP126Q9P2H0 1117 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 PDE8AO60658 829 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms