RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	BCL2L13	Q9BXK5	485 aa		13.28	□□□□□ -0.28
FXR1-222	ENST00000498658	SCN4A	P35499	1836 aa		13.27	□□□□□ -0.28
FXR1-222	ENST00000498658	ANKRD18B	A2A2Z9	1011 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	GPSM2	P81274	684 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	IFIT5	Q13325	482 aa	Known RBP	13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	SMC1B	Q8NDV3	1235 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	MPHOSPH8	Q99549	860 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	API5	Q9BZZ5	524 aa	Known RBP	13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	GGA1	Q9UJY5	639 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	XDH	P47989	1333 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	ZBED9	Q6R2W3	1325 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	KIF16B	Q96L93	1317 aa		13.27	□□□□□ -0.29
FXR1-222	ENST00000498658	UTY	O14607	1347 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	ITGA6	P23229	1130 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	ATP2B4	P23634	1241 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	LMOD1	P29536	600 aa	Predicted RBP	13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	CCT4	P50991	539 aa	Known RBP	13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	RARS	P54136	660 aa	Known RBP	13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	TNIP1	Q15025	636 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	CCDC57	Q2TAC2	916 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	PNMA8A	Q86V59	439 aa	Predicted RBP	13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	TBC1D16	Q8TBP0	767 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	ARHGAP45	Q92619	1136 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	ZNF541	Q9H0D2	1346 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	HACL1	Q9UJ83	578 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	HDAC5	Q9UQL6	1122 aa		13.26	□□□□□ -0.29
FXR1-222	ENST00000498658	POTEC	B2RU33	542 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658		G3V3G9	751 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	IPO8	O15397	1037 aa	Known RBP	13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	FOXO4	P98177	505 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	FAM161A	Q3B820	660 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	DCAF8	Q5TAQ9	597 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	SLC51A	Q86UW1	340 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	ANKRD2	Q9GZV1	360 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	POLL	Q9UGP5	575 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	NOB1	Q9ULX3	412 aa	Known RBP	13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	MINPP1	Q9UNW1	487 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	CHMP3	Q9Y3E7	222 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	GJA3	Q9Y6H8	435 aa		13.25	□□□□□ -0.29
FXR1-222	ENST00000498658	UFL1	O94874	794 aa		13.24	□□□□□ -0.29
FXR1-222	ENST00000498658	HSPA6	P17066	643 aa		13.24	□□□□□ -0.29
FXR1-222	ENST00000498658	CIAPIN1	Q6FI81	312 aa		13.24	□□□□□ -0.29
FXR1-222	ENST00000498658	LMBR1L	Q6UX01	489 aa		13.24	□□□□□ -0.29
FXR1-222	ENST00000498658	LEMD3	Q9Y2U8	911 aa		13.24	□□□□□ -0.29
FXR1-222	ENST00000498658	DUOX1	Q9NRD9	1551 aa		13.24	□□□□□ -0.29
FXR1-222	ENST00000498658	LTBP1	Q14766	1721 aa		13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	EPHX2	P34913	555 aa		13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	CXCL9	Q07325	125 aa		13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	TAF7L	Q5H9L4	462 aa		13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	LDHD	Q86WU2	507 aa		13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	COL4A5	P29400	1685 aa		13.23	□□□□□ -0.29
FXR1-222	ENST00000498658	COL4A1	P02462	1669 aa		13.22	□□□□□ -0.29
FXR1-222	ENST00000498658	RIMBP2	O15034	1052 aa		13.22	□□□□□ -0.29
FXR1-222	ENST00000498658	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.22	□□□□□ -0.29
FXR1-222	ENST00000498658	APLP1	P51693	650 aa		13.22	□□□□□ -0.29
FXR1-222	ENST00000498658	CHADL	Q6NUI6	762 aa		13.21	□□□□□ -0.29
FXR1-222	ENST00000498658	SUCLG2	Q96I99	432 aa		13.21	□□□□□ -0.29
FXR1-222	ENST00000498658	USP44	Q9H0E7	712 aa		13.21	□□□□□ -0.29
FXR1-222	ENST00000498658	MED23	Q9ULK4	1368 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	ECE2	O60344	883 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	RAD17	O75943	681 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	RPS12	P25398	132 aa	Known RBP	13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	KCNJ4	P48050	445 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	SCNN1D	P51172	638 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	RABL6	Q3YEC7	729 aa	Predicted RBP	13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	EPHA10	Q5JZY3	1008 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	LDHAL6A	Q6ZMR3	332 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	USP50	Q70EL3	339 aa	Predicted RBP	13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	PODN	Q7Z5L7	613 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	DBNDD1	Q9H9R9	158 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	GPRC5D	Q9NZD1	345 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	SPEF2	Q9C093	1822 aa		13.2	□□□□□ -0.3
FXR1-222	ENST00000498658	ZNF804B	A4D1E1	1349 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	YDJC	A8MPS7	323 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	UBTFL1	P0CB47	393 aa	Predicted RBP	13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	CHRND	Q07001	517 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	DOK7	Q18PE1	504 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	EAPP	Q56P03	285 aa	Predicted RBP	13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	ATF7IP	Q6VMQ6	1270 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	DPF2	Q92785	391 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	BICC1	Q9H694	974 aa	Known RBP	13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	CNNM1	Q9NRU3	951 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	ADARB2	Q9NS39	739 aa	Known RBP	13.19	□□□□□ -0.3
FXR1-222	ENST00000498658	CLEC11A	Q9Y240	323 aa		13.19	□□□□□ -0.3
FXR1-222	ENST00000498658		H7C1D1	291 aa		13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	GMPS	P49915	693 aa	Predicted RBP	13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	ZKSCAN2	Q63HK3	967 aa		13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	INTS3	Q68E01	1043 aa	Known RBP	13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	FRAT1	Q92837	279 aa	Predicted RBP	13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	KAZALD1	Q96I82	304 aa		13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	COA1	Q9GZY4	146 aa		13.18	□□□□□ -0.3
FXR1-222	ENST00000498658	MROH5	Q6ZUA9	1318 aa		13.17	□□□□□ -0.3
FXR1-222	ENST00000498658	PSMD14	O00487	310 aa		13.17	□□□□□ -0.3
FXR1-222	ENST00000498658	EPS15	P42566	896 aa		13.17	□□□□□ -0.3
FXR1-222	ENST00000498658	GPR101	Q96P66	508 aa	Predicted RBP	13.17	□□□□□ -0.3
FXR1-222	ENST00000498658	CNOT7	Q9UIV1	285 aa	Known RBP	13.17	□□□□□ -0.3
FXR1-222	ENST00000498658	CEP350	Q5VT06	3117 aa		13.16	□□□□□ -0.3
FXR1-222	ENST00000498658	USP17L3	A6NCW0	530 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms