RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 HOXA10P31260 410 aaPredicted RBP23.94■■□□□ 1.42
USP39-218ENST00000493829 IL15P40933 162 aaPredicted RBP23.94■■□□□ 1.42
USP39-218ENST00000493829 NUCB1Q02818 461 aa23.94■■□□□ 1.42
USP39-218ENST00000493829 ERC1Q8IUD2 1116 aa23.94■■□□□ 1.42
USP39-218ENST00000493829 A0A1B0GUL6 1792 aa23.94■■□□□ 1.42
USP39-218ENST00000493829 DPEP1P16444 411 aa23.93■■□□□ 1.42
USP39-218ENST00000493829 METTL24Q5JXM2 366 aa23.93■■□□□ 1.42
USP39-218ENST00000493829 KIF1BPQ96EK5 621 aa23.93■■□□□ 1.42
USP39-218ENST00000493829 WWC3Q9ULE0 1092 aa23.93■■□□□ 1.42
USP39-218ENST00000493829 CHD1LQ86WJ1 897 aa23.92■■□□□ 1.42
USP39-218ENST00000493829 HELBQ8NG08 1087 aaPredicted RBP23.92■■□□□ 1.42
USP39-218ENST00000493829 CRAMP1Q96RY5 1269 aa23.92■■□□□ 1.42
USP39-218ENST00000493829 RIPOR2Q9Y4F9 1068 aa23.92■■□□□ 1.42
USP39-218ENST00000493829 PPEF1O14829 653 aaPredicted RBP23.92■■□□□ 1.42
USP39-218ENST00000493829 STYK1Q6J9G0 422 aa23.91■■□□□ 1.42
USP39-218ENST00000493829 BSDC1Q9NW68 430 aaPredicted RBP23.91■■□□□ 1.42
USP39-218ENST00000493829 FBXO3Q9UK99 471 aa23.9■■□□□ 1.42
USP39-218ENST00000493829 TAF5LO75529 589 aa23.89■■□□□ 1.42
USP39-218ENST00000493829 CHRNDQ07001 517 aa23.89■■□□□ 1.42
USP39-218ENST00000493829 CEP126Q9P2H0 1117 aa23.89■■□□□ 1.42
USP39-218ENST00000493829 ZNF219Q9P2Y4 722 aaPredicted RBP23.89■■□□□ 1.42
USP39-218ENST00000493829 MROH5Q6ZUA9 1318 aa23.89■■□□□ 1.42
USP39-218ENST00000493829 PRPF40BQ6NWY9 871 aaKnown RBP23.89■■□□□ 1.41
USP39-218ENST00000493829 C16orf71Q8IYS4 520 aaPredicted RBP23.89■■□□□ 1.41
USP39-218ENST00000493829 LRRC37AA6NMS7 1700 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 SLX4Q8IY92 1834 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 ALDH1B1P30837 517 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 OLFM4Q6UX06 510 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 AACSQ86V21 672 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 OTUD7AQ8TE49 926 aaPredicted RBP23.88■■□□□ 1.41
USP39-218ENST00000493829 MINPP1Q9UNW1 487 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 CD2APQ9Y5K6 639 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 ZNF609O15014 1411 aa23.88■■□□□ 1.41
USP39-218ENST00000493829 PDE4AP27815 886 aa23.87■■□□□ 1.41
USP39-218ENST00000493829 RGS3P49796 1198 aa23.87■■□□□ 1.41
USP39-218ENST00000493829 NLGN2Q8NFZ4 835 aa23.87■■□□□ 1.41
USP39-218ENST00000493829 SNAP23O00161 211 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 BBOX1O75936 387 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 TGFB2P61812 414 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 TNNI3KQ59H18 835 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 CLASRPQ8N2M8 674 aaKnown RBP23.86■■□□□ 1.41
USP39-218ENST00000493829 VGLL2Q8N8G2 317 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 FPGT-TNNI3KV9GXZ4 949 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 KCNA3P22001 575 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 CNKSR1Q969H4 720 aa23.86■■□□□ 1.41
USP39-218ENST00000493829 FHDC1Q9C0D6 1143 aaPredicted RBP23.86■■□□□ 1.41
USP39-218ENST00000493829 TLR7Q9NYK1 1049 aaKnown RBP23.86■■□□□ 1.41
USP39-218ENST00000493829 EAF2Q96CJ1 260 aaPredicted RBP23.85■■□□□ 1.41
USP39-218ENST00000493829 CCDC8Q9H0W5 538 aaPredicted RBP23.85■■□□□ 1.41
USP39-218ENST00000493829 PDE8BO95263 885 aa23.84■■□□□ 1.41
USP39-218ENST00000493829 NEUROD6Q96NK8 337 aa23.84■■□□□ 1.41
USP39-218ENST00000493829 ANKIB1Q9P2G1 1089 aa23.84■■□□□ 1.41
USP39-218ENST00000493829 BRCA1P38398 1863 aaKnown RBP23.84■■□□□ 1.41
USP39-218ENST00000493829 WTIPA6NIX2 430 aaPredicted RBP23.83■■□□□ 1.41
USP39-218ENST00000493829 IFIT2P09913 472 aaKnown RBP23.83■■□□□ 1.41
USP39-218ENST00000493829 ATP2B3Q16720 1220 aa23.83■■□□□ 1.41
USP39-218ENST00000493829 A0A1B0GUL7 405 aa23.83■■□□□ 1.4
USP39-218ENST00000493829 TIMM10P62072 90 aa23.83■■□□□ 1.4
USP39-218ENST00000493829 GPSM2P81274 684 aa23.83■■□□□ 1.4
USP39-218ENST00000493829 TSHZ3Q63HK5 1081 aa23.83■■□□□ 1.4
USP39-218ENST00000493829 TTLL6Q8N841 843 aa23.83■■□□□ 1.4
USP39-218ENST00000493829 ATP6V0A2Q9Y487 856 aa23.83■■□□□ 1.4
USP39-218ENST00000493829 KCNJ4P48050 445 aa23.82■■□□□ 1.4
USP39-218ENST00000493829 PUM3Q15397 648 aaKnown RBP23.82■■□□□ 1.4
USP39-218ENST00000493829 ANKRD2Q9GZV1 360 aa23.82■■□□□ 1.4
USP39-218ENST00000493829 NSFL1CQ9UNZ2 370 aaKnown RBP23.82■■□□□ 1.4
USP39-218ENST00000493829 ARAP2Q8WZ64 1704 aa23.82■■□□□ 1.4
USP39-218ENST00000493829 TMC4Q7Z404 712 aa23.81■■□□□ 1.4
USP39-218ENST00000493829 PIM2Q9P1W9 311 aa23.81■■□□□ 1.4
USP39-218ENST00000493829 AKAP2Q9Y2D5 859 aa23.81■■□□□ 1.4
USP39-218ENST00000493829 ADORA1P30542 326 aa23.8■■□□□ 1.4
USP39-218ENST00000493829 SP8Q8IXZ3 490 aa23.8■■□□□ 1.4
USP39-218ENST00000493829 DBNDD2Q9BQY9 259 aa23.8■■□□□ 1.4
USP39-218ENST00000493829 DBNLQ9UJU6 430 aaKnown RBP23.8■■□□□ 1.4
USP39-218ENST00000493829 LTBP1Q14766 1721 aa23.8■■□□□ 1.4
USP39-218ENST00000493829 XDHP47989 1333 aa23.8■■□□□ 1.4
USP39-218ENST00000493829 C21orf2O43822 256 aa23.79■■□□□ 1.4
USP39-218ENST00000493829 GPR101Q96P66 508 aaPredicted RBP23.79■■□□□ 1.4
USP39-218ENST00000493829 TMX4Q9H1E5 349 aaPredicted RBP23.79■■□□□ 1.4
USP39-218ENST00000493829 GPR108Q9NPR9 543 aa23.79■■□□□ 1.4
USP39-218ENST00000493829 UFL1O94874 794 aa23.78■■□□□ 1.4
USP39-218ENST00000493829 SLC5A1P13866 664 aa23.78■■□□□ 1.4
USP39-218ENST00000493829 MX1P20591 662 aa23.78■■□□□ 1.4
USP39-218ENST00000493829 KLRK1P26718 216 aa23.78■■□□□ 1.4
USP39-218ENST00000493829 DALRD3Q5D0E6 543 aaKnown RBP23.78■■□□□ 1.4
USP39-218ENST00000493829 DUOX1Q9NRD9 1551 aa23.78■■□□□ 1.4
USP39-218ENST00000493829 FGFR2P21802 821 aa23.77■■□□□ 1.4
USP39-218ENST00000493829 LPIN2Q92539 896 aa23.77■■□□□ 1.4
USP39-218ENST00000493829 XAGE2Q96GT9 111 aa23.77■■□□□ 1.4
USP39-218ENST00000493829 ZNF804BA4D1E1 1349 aa23.77■■□□□ 1.4
USP39-218ENST00000493829 PLEKHM2Q8IWE5 1019 aa23.76■■□□□ 1.39
USP39-218ENST00000493829 GGA1Q9UJY5 639 aa23.76■■□□□ 1.39
USP39-218ENST00000493829 BCS1LQ9Y276 419 aa23.76■■□□□ 1.39
USP39-218ENST00000493829 SALL3Q9BXA9 1300 aa23.76■■□□□ 1.39
USP39-218ENST00000493829 IFIT1P09914 478 aaKnown RBP23.76■■□□□ 1.39
USP39-218ENST00000493829 GORABQ5T7V8 394 aa23.76■■□□□ 1.39
USP39-218ENST00000493829 DPP8Q6V1X1 898 aaPredicted RBP23.76■■□□□ 1.39
USP39-218ENST00000493829 MPNDQ8N594 471 aa23.76■■□□□ 1.39
USP39-218ENST00000493829 C6orf229H3BNL8 230 aa23.75■■□□□ 1.39
USP39-218ENST00000493829 C7orf43Q8WVR3 580 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms