RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GNAI2P04899 355 aa21.22■□□□□ 0.99
SCAF11-206ENST00000474828 IARSP41252 1262 aaKnown RBP21.22■□□□□ 0.99
SCAF11-206ENST00000474828 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
SCAF11-206ENST00000474828 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
SCAF11-206ENST00000474828 POLLQ9UGP5 575 aa21.22■□□□□ 0.99
SCAF11-206ENST00000474828 XDHP47989 1333 aa21.22■□□□□ 0.99
SCAF11-206ENST00000474828 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
SCAF11-206ENST00000474828 TBC1D16Q8TBP0 767 aa21.21■□□□□ 0.99
SCAF11-206ENST00000474828 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
SCAF11-206ENST00000474828 FBXO3Q9UK99 471 aa21.21■□□□□ 0.99
SCAF11-206ENST00000474828 RIPOR2Q9Y4F9 1068 aa21.21■□□□□ 0.99
SCAF11-206ENST00000474828 PTPN12Q05209 780 aaKnown RBP21.2■□□□□ 0.98
SCAF11-206ENST00000474828 ITPRIPQ8IWB1 547 aa21.2■□□□□ 0.98
SCAF11-206ENST00000474828 MPHOSPH8Q99549 860 aa21.2■□□□□ 0.98
SCAF11-206ENST00000474828 DDX19BQ9UMR2 479 aa21.2■□□□□ 0.98
SCAF11-206ENST00000474828 NSFL1CQ9UNZ2 370 aaKnown RBP21.2■□□□□ 0.98
SCAF11-206ENST00000474828 FZD9O00144 591 aa21.19■□□□□ 0.98
SCAF11-206ENST00000474828 RRP1P56182 461 aaKnown RBP21.19■□□□□ 0.98
SCAF11-206ENST00000474828 C20orf194Q5TEA3 1177 aa21.19■□□□□ 0.98
SCAF11-206ENST00000474828 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
SCAF11-206ENST00000474828 ZNF594Q96JF6 807 aaPredicted RBP21.19■□□□□ 0.98
SCAF11-206ENST00000474828 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
SCAF11-206ENST00000474828 ZBTB40Q9NUA8 1239 aa21.19■□□□□ 0.98
SCAF11-206ENST00000474828 CCDC88AQ3V6T2 1871 aa21.19■□□□□ 0.98
SCAF11-206ENST00000474828 TIAM2Q8IVF5 1701 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 A0A1B0GUL6 1792 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 ATP2B4P23634 1241 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 CHRNDQ07001 517 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 COPRSQ9NQ92 184 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 LEMD3Q9Y2U8 911 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 CHMP3Q9Y3E7 222 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 IRS2Q9Y4H2 1338 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 SPEF2Q9C093 1822 aa21.18■□□□□ 0.98
SCAF11-206ENST00000474828 C15orf52Q6ZUT6 534 aaKnown RBP21.17■□□□□ 0.98
SCAF11-206ENST00000474828 GGA1Q9UJY5 639 aa21.17■□□□□ 0.98
SCAF11-206ENST00000474828 MED23Q9ULK4 1368 aa21.16■□□□□ 0.98
SCAF11-206ENST00000474828 CIAO1O76071 339 aa21.16■□□□□ 0.98
SCAF11-206ENST00000474828 VGLL2Q8N8G2 317 aa21.16■□□□□ 0.98
SCAF11-206ENST00000474828 PUS3Q9BZE2 481 aaKnown RBP21.16■□□□□ 0.98
SCAF11-206ENST00000474828 ANKIB1Q9P2G1 1089 aa21.16■□□□□ 0.98
SCAF11-206ENST00000474828 COG6Q9Y2V7 657 aa21.16■□□□□ 0.98
SCAF11-206ENST00000474828 MROH5Q6ZUA9 1318 aa21.15■□□□□ 0.98
SCAF11-206ENST00000474828 POLA2Q14181 598 aa21.15■□□□□ 0.98
SCAF11-206ENST00000474828 ATG9AQ7Z3C6 839 aa21.15■□□□□ 0.98
SCAF11-206ENST00000474828 SSH3Q8TE77 659 aa21.15■□□□□ 0.98
SCAF11-206ENST00000474828 EYA3Q99504 573 aa21.15■□□□□ 0.98
SCAF11-206ENST00000474828 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
SCAF11-206ENST00000474828 WTIPA6NIX2 430 aaPredicted RBP21.14■□□□□ 0.97
SCAF11-206ENST00000474828 EYA2O00167 538 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 PPIP5K2O43314 1243 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 UFL1O94874 794 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 ATP8B2P98198 1209 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 AOC3Q16853 763 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 TAF7LQ5H9L4 462 aa21.14■□□□□ 0.97
SCAF11-206ENST00000474828 PNMA6EA0A0J9YXQ4 647 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 GLTPD2A6NH11 291 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 SRGAP3O43295 1099 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 LRRC24Q50LG9 513 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 LARGE2Q8N3Y3 721 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 KLHDC4Q8TBB5 520 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 CNNM1Q9NRU3 951 aa21.13■□□□□ 0.97
SCAF11-206ENST00000474828 ZNF804BA4D1E1 1349 aa21.12■□□□□ 0.97
SCAF11-206ENST00000474828 C6orf229H3BNL8 230 aa21.12■□□□□ 0.97
SCAF11-206ENST00000474828 JDP2Q8WYK2 163 aa21.12■□□□□ 0.97
SCAF11-206ENST00000474828 GPBP1L1Q9HC44 474 aaPredicted RBP21.12■□□□□ 0.97
SCAF11-206ENST00000474828 ZNRF3Q9ULT6 936 aa21.12■□□□□ 0.97
SCAF11-206ENST00000474828 UBE4AQ14139 1066 aa21.11■□□□□ 0.97
SCAF11-206ENST00000474828 CEP85Q6P2H3 762 aa21.11■□□□□ 0.97
SCAF11-206ENST00000474828 ZC3H12CQ9C0D7 883 aaKnown RBP21.11■□□□□ 0.97
SCAF11-206ENST00000474828 PDE8BO95263 885 aa21.1■□□□□ 0.97
SCAF11-206ENST00000474828 NIM1KQ8IY84 436 aa21.1■□□□□ 0.97
SCAF11-206ENST00000474828 ZNF526Q8TF50 670 aaPredicted RBP21.1■□□□□ 0.97
SCAF11-206ENST00000474828 WDR90Q96KV7 1748 aa21.09■□□□□ 0.97
SCAF11-206ENST00000474828 YDJCA8MPS7 323 aa21.09■□□□□ 0.97
SCAF11-206ENST00000474828 TAF5LO75529 589 aa21.09■□□□□ 0.97
SCAF11-206ENST00000474828 FGFR2P21802 821 aa21.09■□□□□ 0.97
SCAF11-206ENST00000474828 IL15P40933 162 aaPredicted RBP21.09■□□□□ 0.97
SCAF11-206ENST00000474828 RPAP2Q8IXW5 612 aaPredicted RBP21.09■□□□□ 0.97
SCAF11-206ENST00000474828 L3MBTL3Q96JM7 780 aaPredicted RBP21.09■□□□□ 0.97
SCAF11-206ENST00000474828 NOP58Q9Y2X3 529 aaKnown RBP21.09■□□□□ 0.97
SCAF11-206ENST00000474828 ZNF609O15014 1411 aa21.09■□□□□ 0.97
SCAF11-206ENST00000474828 ZNF541Q9H0D2 1346 aa21.08■□□□□ 0.97
SCAF11-206ENST00000474828 ZBTB22O15209 634 aa21.08■□□□□ 0.97
SCAF11-206ENST00000474828 PODNQ7Z5L7 613 aa21.08■□□□□ 0.97
SCAF11-206ENST00000474828 TXNRD3Q86VQ6 643 aa21.08■□□□□ 0.97
SCAF11-206ENST00000474828 GPC2Q8N158 579 aa21.08■□□□□ 0.97
SCAF11-206ENST00000474828 HELBQ8NG08 1087 aaPredicted RBP21.08■□□□□ 0.97
SCAF11-206ENST00000474828 GPR101Q96P66 508 aaPredicted RBP21.08■□□□□ 0.97
SCAF11-206ENST00000474828 C1orf115Q9H7X2 142 aa21.08■□□□□ 0.97
SCAF11-206ENST00000474828 PA2G4Q9UQ80 394 aaKnown RBP21.08■□□□□ 0.97
SCAF11-206ENST00000474828 KDM2BQ8NHM5 1336 aa21.07■□□□□ 0.96
SCAF11-206ENST00000474828 SNAP23O00161 211 aa21.07■□□□□ 0.96
SCAF11-206ENST00000474828 CXCL9Q07325 125 aa21.07■□□□□ 0.96
SCAF11-206ENST00000474828 DPY19L2Q6NUT2 758 aa21.07■□□□□ 0.96
SCAF11-206ENST00000474828 SIRT2Q8IXJ6 389 aa21.07■□□□□ 0.96
SCAF11-206ENST00000474828 POTECB2RU33 542 aa21.06■□□□□ 0.96
SCAF11-206ENST00000474828 RIMBP2O15034 1052 aa21.06■□□□□ 0.96
SCAF11-206ENST00000474828 KLRK1P26718 216 aa21.06■□□□□ 0.96
SCAF11-206ENST00000474828 METTL24Q5JXM2 366 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms