RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CCDC88AQ3V6T2 1871 aa15.51■□□□□ 0.07
DDX56-209ENST00000473924 ZBTB7BO15156 539 aaPredicted RBP15.51■□□□□ 0.07
DDX56-209ENST00000473924 IARSP41252 1262 aaKnown RBP15.51■□□□□ 0.07
DDX56-209ENST00000473924 PRELPP51888 382 aa15.51■□□□□ 0.07
DDX56-209ENST00000473924 DDX19BQ9UMR2 479 aa15.51■□□□□ 0.07
DDX56-209ENST00000473924 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
DDX56-209ENST00000473924 XDHP47989 1333 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 PPIP5K2O43314 1243 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 RRP1P56182 461 aaKnown RBP15.5■□□□□ 0.07
DDX56-209ENST00000473924 C20orf194Q5TEA3 1177 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 LARGE2Q8N3Y3 721 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 RTFDC1Q9BY42 306 aaPredicted RBP15.5■□□□□ 0.07
DDX56-209ENST00000473924 ANKRD2Q9GZV1 360 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 CHMP4BQ9H444 224 aaKnown RBP15.5■□□□□ 0.07
DDX56-209ENST00000473924 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
DDX56-209ENST00000473924 UFL1O94874 794 aa15.49■□□□□ 0.07
DDX56-209ENST00000473924 AOC3Q16853 763 aa15.49■□□□□ 0.07
DDX56-209ENST00000473924 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
DDX56-209ENST00000473924 JDP2Q8WYK2 163 aa15.49■□□□□ 0.07
DDX56-209ENST00000473924 EYA3Q99504 573 aa15.49■□□□□ 0.07
DDX56-209ENST00000473924 VPS33BQ9H267 617 aa15.49■□□□□ 0.07
DDX56-209ENST00000473924 SRGAP3O43295 1099 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 ATP2B4P23634 1241 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 KCNJ4P48050 445 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 CHRNDQ07001 517 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 KLHDC4Q8TBB5 520 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 TBC1D16Q8TBP0 767 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 C1orf115Q9H7X2 142 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 POLLQ9UGP5 575 aa15.48■□□□□ 0.07
DDX56-209ENST00000473924 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
DDX56-209ENST00000473924 RIMBP2O15034 1052 aa15.47■□□□□ 0.07
DDX56-209ENST00000473924 TIAM2Q8IVF5 1701 aa15.47■□□□□ 0.07
DDX56-209ENST00000473924 NIM1KQ8IY84 436 aa15.47■□□□□ 0.07
DDX56-209ENST00000473924 HELBQ8NG08 1087 aaPredicted RBP15.47■□□□□ 0.07
DDX56-209ENST00000473924 PUS3Q9BZE2 481 aaKnown RBP15.47■□□□□ 0.07
DDX56-209ENST00000473924 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
DDX56-209ENST00000473924 DICER1Q9UPY3 1922 aaKnown RBP15.47■□□□□ 0.07
DDX56-209ENST00000473924 DUOX1Q9NRD9 1551 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 G3V3G9 751 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 TAF5LO75529 589 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 RFX5P48382 616 aaPredicted RBP15.46■□□□□ 0.07
DDX56-209ENST00000473924 PTPN12Q05209 780 aaKnown RBP15.46■□□□□ 0.07
DDX56-209ENST00000473924 KIAA2012Q0VF49 1180 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 MTX1Q13505 466 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 GPR101Q96P66 508 aaPredicted RBP15.46■□□□□ 0.07
DDX56-209ENST00000473924 SIL1Q9H173 461 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 LEMD3Q9Y2U8 911 aa15.46■□□□□ 0.07
DDX56-209ENST00000473924 LTBP1Q14766 1721 aa15.46■□□□□ 0.06
DDX56-209ENST00000473924 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
DDX56-209ENST00000473924 LRRC24Q50LG9 513 aa15.45■□□□□ 0.06
DDX56-209ENST00000473924 METTL24Q5JXM2 366 aa15.45■□□□□ 0.06
DDX56-209ENST00000473924 DPY19L2Q6NUT2 758 aa15.45■□□□□ 0.06
DDX56-209ENST00000473924 ZNF526Q8TF50 670 aaPredicted RBP15.45■□□□□ 0.06
DDX56-209ENST00000473924 ZNF804BA4D1E1 1349 aa15.44■□□□□ 0.06
DDX56-209ENST00000473924 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
DDX56-209ENST00000473924 EYA2O00167 538 aa15.44■□□□□ 0.06
DDX56-209ENST00000473924 EIF6P56537 245 aaKnown RBP15.44■□□□□ 0.06
DDX56-209ENST00000473924 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
DDX56-209ENST00000473924 PA2G4Q9UQ80 394 aaKnown RBP15.44■□□□□ 0.06
DDX56-209ENST00000473924 RIPOR2Q9Y4F9 1068 aa15.44■□□□□ 0.06
DDX56-209ENST00000473924 SUPT16HQ9Y5B9 1047 aaKnown RBP15.44■□□□□ 0.06
DDX56-209ENST00000473924 WTIPA6NIX2 430 aaPredicted RBP15.43■□□□□ 0.06
DDX56-209ENST00000473924 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
DDX56-209ENST00000473924 COPRSQ9NQ92 184 aa15.43■□□□□ 0.06
DDX56-209ENST00000473924 ZBTB40Q9NUA8 1239 aa15.43■□□□□ 0.06
DDX56-209ENST00000473924 ZNRF3Q9ULT6 936 aa15.43■□□□□ 0.06
DDX56-209ENST00000473924 KDM2BQ8NHM5 1336 aa15.43■□□□□ 0.06
DDX56-209ENST00000473924 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
DDX56-209ENST00000473924 FZD9O00144 591 aa15.42■□□□□ 0.06
DDX56-209ENST00000473924 CIAO1O76071 339 aa15.42■□□□□ 0.06
DDX56-209ENST00000473924 DOK7Q18PE1 504 aa15.42■□□□□ 0.06
DDX56-209ENST00000473924 CEP85Q6P2H3 762 aa15.42■□□□□ 0.06
DDX56-209ENST00000473924 DBNDD1Q9H9R9 158 aa15.42■□□□□ 0.06
DDX56-209ENST00000473924 COL4A5P29400 1685 aa15.41■□□□□ 0.06
DDX56-209ENST00000473924 GLTPD2A6NH11 291 aa15.41■□□□□ 0.06
DDX56-209ENST00000473924 SNAP23O00161 211 aa15.41■□□□□ 0.06
DDX56-209ENST00000473924 ECE2O60344 883 aa15.41■□□□□ 0.06
DDX56-209ENST00000473924 PDE8BO95263 885 aa15.41■□□□□ 0.06
DDX56-209ENST00000473924 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
DDX56-209ENST00000473924 ZNF784Q8NCA9 323 aaPredicted RBP15.41■□□□□ 0.06
DDX56-209ENST00000473924 GPBP1L1Q9HC44 474 aaPredicted RBP15.41■□□□□ 0.06
DDX56-209ENST00000473924 A0A1B0GUL6 1792 aa15.41■□□□□ 0.06
DDX56-209ENST00000473924 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.065e-8■□□□□ 8.8
DDX56-209ENST00000473924 OS9Q13438 667 aaPredicted RBP15.4■□□□□ 0.06
DDX56-209ENST00000473924 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 POLA2Q14181 598 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 ATG9AQ7Z3C6 839 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
DDX56-209ENST00000473924 SSH3Q8TE77 659 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 CEP126Q9P2H0 1117 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 GJA3Q9Y6H8 435 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 ZNF541Q9H0D2 1346 aa15.4■□□□□ 0.06
DDX56-209ENST00000473924 HMMRO75330 724 aa15.39■□□□□ 0.05
DDX56-209ENST00000473924 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
DDX56-209ENST00000473924 RAD17O75943 681 aa15.39■□□□□ 0.05
DDX56-209ENST00000473924 DDNO94850 711 aaPredicted RBP15.39■□□□□ 0.05
DDX56-209ENST00000473924 KLRK1P26718 216 aa15.39■□□□□ 0.05
DDX56-209ENST00000473924 CIAPIN1Q6FI81 312 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms