RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 Q6ZUG5 572 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 CREBRFQ8IUR6 639 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 DRC7Q8IY82 874 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 NFATC2IPQ8NCF5 419 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 RAPGEF4Q8WZA2 1011 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 BRF1Q92994 677 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
ABCF3-210ENST00000473311 COPRSQ9NQ92 184 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 SLIT3O75094 1523 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 C5P01031 1676 aa16.47■□□□□ 0.23
ABCF3-210ENST00000473311 NR1I2O75469 434 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 CHGBP05060 677 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 PTGS1P23219 599 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 ANKRD13DQ6ZTN6 518 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 COL15A1P39059 1388 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 MRC1P22897 1456 aa16.46■□□□□ 0.23
ABCF3-210ENST00000473311 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.22
ABCF3-210ENST00000473311 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.22
ABCF3-210ENST00000473311 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.22
ABCF3-210ENST00000473311 PGBD1Q96JS3 809 aa16.46■□□□□ 0.22
ABCF3-210ENST00000473311 BCL2L12Q9HB09 334 aa16.46■□□□□ 0.22
ABCF3-210ENST00000473311 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 ANKRD7Q92527 254 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
ABCF3-210ENST00000473311 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
ABCF3-210ENST00000473311 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
ABCF3-210ENST00000473311 ZNF609O15014 1411 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 ERBB3P21860 1342 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 NLRP2Q9NX02 1062 aa16.45■□□□□ 0.22
ABCF3-210ENST00000473311 CYP21A2P08686 494 aa16.44■□□□□ 0.22
ABCF3-210ENST00000473311 RESTQ13127 1097 aa16.44■□□□□ 0.22
ABCF3-210ENST00000473311 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
ABCF3-210ENST00000473311 CCDC186Q7Z3E2 898 aa16.44■□□□□ 0.22
ABCF3-210ENST00000473311 CAMTA1Q9Y6Y1 1673 aa16.44■□□□□ 0.22
ABCF3-210ENST00000473311 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-210ENST00000473311 YY1AP1Q9H869 796 aa16.44■□□□□ 0.22
ABCF3-210ENST00000473311 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
ABCF3-210ENST00000473311 ZNF165P49910 485 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
ABCF3-210ENST00000473311 MCMDC2Q4G0Z9 681 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 RBM43Q6ZSC3 357 aaKnown RBP16.43■□□□□ 0.22
ABCF3-210ENST00000473311 DNAJC25Q9H1X3 360 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
ABCF3-210ENST00000473311 SYCP1Q15431 976 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 KRT28Q7Z3Y7 464 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
ABCF3-210ENST00000473311 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-210ENST00000473311 FOSBP53539 338 aa16.42■□□□□ 0.22
ABCF3-210ENST00000473311 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
ABCF3-210ENST00000473311 A0A087WZG4 1122 aa16.42■□□□□ 0.22
ABCF3-210ENST00000473311 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-210ENST00000473311 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-210ENST00000473311 CFAP45Q9UL16 551 aa16.42■□□□□ 0.22
ABCF3-210ENST00000473311 SCN11AQ9UI33 1791 aa16.42■□□□□ 0.22
ABCF3-210ENST00000473311 TULP2O00295 520 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
ABCF3-210ENST00000473311 PHKG2P15735 406 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 ZNF75DP51815 510 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 SCRN1Q12765 414 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
ABCF3-210ENST00000473311 NRBP1Q9UHY1 535 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
ABCF3-210ENST00000473311 LRMPQ12912 555 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-210ENST00000473311 HAUS7Q99871 368 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
ABCF3-210ENST00000473311 RABL6Q3YEC7 729 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-210ENST00000473311 PLA2G4DQ86XP0 818 aa16.4■□□□□ 0.22
ABCF3-210ENST00000473311 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
ABCF3-210ENST00000473311 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
ABCF3-210ENST00000473311 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
ABCF3-210ENST00000473311 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
ABCF3-210ENST00000473311 NEUROD6Q96NK8 337 aa16.4■□□□□ 0.22
ABCF3-210ENST00000473311 IFNL2Q8IZJ0 200 aa16.39■□□□□ 0.21
ABCF3-210ENST00000473311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.39■□□□□ 0.21
ABCF3-210ENST00000473311 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
ABCF3-210ENST00000473311 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
ABCF3-210ENST00000473311 GOLIM4O00461 696 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 CTIFO43310 598 aaKnown RBP16.38■□□□□ 0.21
ABCF3-210ENST00000473311 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.213e-6■■■□□ 15.1
ABCF3-210ENST00000473311 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
ABCF3-210ENST00000473311 CLIP2Q9UDT6 1046 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 GOLGA6L19H0YKK7 550 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 PFKFB2O60825 505 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 IGSF3O75054 1194 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 SLFNL1Q499Z3 407 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms