RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 CCZ1BP86790 482 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 CCZ1P86791 482 aaPredicted RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 CCDC158Q5M9N0 1113 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 LARP1BQ659C4 914 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 SUGP1Q8IWZ8 645 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 EFCAB13Q8IY85 973 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 CEP120Q8N960 986 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 SGSM3Q96HU1 749 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 CALR3Q96L12 384 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 FMNL2Q96PY5 1086 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 CEP89Q96ST8 783 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 JPH2Q9BR39 696 aaPredicted RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 FAN1Q9Y2M0 1017 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 C9orf84Q5VXU9 1444 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 NSD3Q9BZ95 1437 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 EFCAB8A8MWE9 144 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 IRF6O14896 467 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 EIF3JO75822 258 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 CPA1P15085 419 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 ETF1P62495 437 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 CEBPZQ03701 1054 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 SWT1Q5T5J6 900 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 TMC6Q7Z403 805 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 THUMPD2Q9BTF0 503 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 SRRTQ9BXP5 876 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 DDX19AQ9NUU7 478 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS50-210ENST00000471188 NOS1P29475 1434 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 CDC42BPAQ5VT25 1732 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 A0A087WUV0 522 aaPredicted RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 SRGAP3O43295 1099 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 AK2P54819 239 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 GSCP56915 257 aaPredicted RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 GSDMDP57764 484 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 ANAPC15P60006 121 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 PDIA6Q15084 440 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 LONRF2Q1L5Z9 754 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 GRIPAP1Q4V328 841 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 E4F1Q66K89 784 aaPredicted RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 TSPYL6Q8N831 410 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 DDX54Q8TDD1 881 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 ZBED2Q9BTP6 218 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 PARD6BQ9BYG5 372 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 PSD3Q9NYI0 1048 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 MKRN1Q9UHC7 482 aaKnown RBP4.91□□□□□ -1.62
VPS50-210ENST00000471188 LIMCH1Q9UPQ0 1083 aa4.91□□□□□ -1.62
VPS50-210ENST00000471188 RGS12O14924 1447 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 KDM5AP29375 1690 aaKnown RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 RIMS1Q86UR5 1692 aaKnown RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 SYNMO15061 1565 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 PPP1R12AO14974 1030 aaPredicted RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 NR1I2O75469 434 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 TADA3O75528 432 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 MLLT3P42568 568 aaPredicted RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 PDE1AP54750 535 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 SEMA3FQ13275 785 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 LRRFIP1Q32MZ4 808 aaKnown RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 FBXW10Q5XX13 1052 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 TTC19Q6DKK2 380 aaPredicted RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 NBPF11Q86T75 865 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 IQUBQ8NA54 791 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 MRFAP1L1Q96HT8 127 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 API5Q9BZZ5 524 aaKnown RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 NBPF3Q9H094 633 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 ZSCAN16Q9H4T2 348 aaPredicted RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 RABEP2Q9H5N1 569 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 BICC1Q9H694 974 aaKnown RBP4.9□□□□□ -1.62
VPS50-210ENST00000471188 MTMR6Q9Y217 621 aa4.9□□□□□ -1.62
VPS50-210ENST00000471188 ABCA6Q8N139 1617 aa4.9□□□□□ -1.63
VPS50-210ENST00000471188 ADGBQ8N7X0 1667 aa4.9□□□□□ -1.63
VPS50-210ENST00000471188 PLEKHO1Q53GL0 409 aaPredicted RBP4.9□□□□□ -1.63
VPS50-210ENST00000471188 C11orf57Q6ZUT1 292 aaPredicted RBP4.9□□□□□ -1.63
VPS50-210ENST00000471188 GPR161Q8N6U8 529 aaKnown RBP4.9□□□□□ -1.63
VPS50-210ENST00000471188 NECAB1Q8N987 351 aa4.9□□□□□ -1.63
VPS50-210ENST00000471188 CNNM3Q8NE01 707 aa4.9□□□□□ -1.63
VPS50-210ENST00000471188 DIP2CQ9Y2E4 1556 aa4.9□□□□□ -1.63
VPS50-210ENST00000471188 TK2O00142 265 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 MPHOSPH10O00566 681 aaKnown RBP4.89□□□□□ -1.63
VPS50-210ENST00000471188 N4BP1O75113 896 aaKnown RBP4.89□□□□□ -1.63
VPS50-210ENST00000471188 MAP4K4O95819 1239 aaPredicted RBP4.89□□□□□ -1.63
VPS50-210ENST00000471188 CDC25BP30305 580 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 GNG11P61952 73 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 PPP2R3AQ06190 1150 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 APOBRQ0VD83 1088 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 CCDC93Q567U6 631 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 JAKMIP3Q5VZ66 844 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 NAIF1Q69YI7 327 aaPredicted RBP4.89□□□□□ -1.63
VPS50-210ENST00000471188 WWC2Q6AWC2 1192 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 CYB5RLQ6IPT4 315 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 C14orf37Q86TY3 774 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 AOPEPQ8N6M6 819 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 FUT8Q9BYC5 575 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 ACBD3Q9H3P7 528 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 CLSTN2Q9H4D0 955 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 CDHR5Q9HBB8 845 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 KIAA1468Q9P260 1216 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 LTBP4Q8N2S1 1624 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 SCAF11Q99590 1463 aaKnown RBP4.89□□□□□ -1.63
VPS50-210ENST00000471188 CCDC189A1A4V9 331 aa4.89□□□□□ -1.63
VPS50-210ENST00000471188 HMMRO75330 724 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms