RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MICALL2Q8IY33 904 aa31.49■■■□□ 2.63
PTCH1-210ENST00000468211 STK31Q9BXU1 1019 aa31.49■■■□□ 2.63
PTCH1-210ENST00000468211 PODXL2Q9NZ53 605 aa31.49■■■□□ 2.63
PTCH1-210ENST00000468211 IL16Q14005 1332 aa31.49■■■□□ 2.63
PTCH1-210ENST00000468211 WDR33Q9C0J8 1336 aaKnown RBP31.49■■■□□ 2.63
PTCH1-210ENST00000468211 ZNF316A6NFI3 1004 aaPredicted RBP31.48■■■□□ 2.63
PTCH1-210ENST00000468211 EYA3Q99504 573 aa31.48■■■□□ 2.63
PTCH1-210ENST00000468211 WBP1LQ9NX94 342 aa31.48■■■□□ 2.63
PTCH1-210ENST00000468211 CWF19L2Q2TBE0 894 aaKnown RBP31.47■■■□□ 2.63
PTCH1-210ENST00000468211 SALL2Q9Y467 1007 aaPredicted RBP31.47■■■□□ 2.63
PTCH1-210ENST00000468211 UFL1O94874 794 aa31.46■■■□□ 2.63
PTCH1-210ENST00000468211 SLC4A2P04920 1241 aa31.46■■■□□ 2.63
PTCH1-210ENST00000468211 CACNA1FO60840 1977 aa31.46■■■□□ 2.63
PTCH1-210ENST00000468211 THSD7BQ9C0I4 1608 aa31.46■■■□□ 2.63
PTCH1-210ENST00000468211 NCBP3Q53F19 620 aaKnown RBP31.45■■■□□ 2.63
PTCH1-210ENST00000468211 SAMD7Q7Z3H4 446 aa31.45■■■□□ 2.63
PTCH1-210ENST00000468211 DPF2Q92785 391 aa31.45■■■□□ 2.63
PTCH1-210ENST00000468211 ANKIB1Q9P2G1 1089 aa31.45■■■□□ 2.63
PTCH1-210ENST00000468211 FANCIQ9NVI1 1328 aa31.45■■■□□ 2.62
PTCH1-210ENST00000468211 H7C1D1 291 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 ANP32CO43423 234 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 CAPN15O75808 1086 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 EGFRP00533 1210 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 CTSWP56202 376 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 ZC3H15Q8WU90 426 aaKnown RBP31.44■■■□□ 2.62
PTCH1-210ENST00000468211 ZC3H12CQ9C0D7 883 aaKnown RBP31.44■■■□□ 2.62
PTCH1-210ENST00000468211 TLL2Q9Y6L7 1015 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 PSME4Q14997 1843 aa31.44■■■□□ 2.62
PTCH1-210ENST00000468211 NEURL1BA8MQ27 555 aa31.43■■■□□ 2.62
PTCH1-210ENST00000468211 CYP4F22Q6NT55 531 aa31.43■■■□□ 2.62
PTCH1-210ENST00000468211 GGA1Q9UJY5 639 aa31.43■■■□□ 2.62
PTCH1-210ENST00000468211 CELF2O95319 508 aaKnown RBP31.42■■■□□ 2.62
PTCH1-210ENST00000468211 NEXNQ0ZGT2 675 aa31.42■■■□□ 2.62
PTCH1-210ENST00000468211 TBC1D10BQ4KMP7 808 aaPredicted RBP31.42■■■□□ 2.62
PTCH1-210ENST00000468211 DLK2Q6UY11 383 aa31.42■■■□□ 2.62
PTCH1-210ENST00000468211 ANKRD18AQ8IVF6 992 aa31.42■■■□□ 2.62
PTCH1-210ENST00000468211 TTLL11Q8NHH1 800 aa31.42■■■□□ 2.62
PTCH1-210ENST00000468211 CAPNS2Q96L46 248 aa31.42■■■□□ 2.62
PTCH1-210ENST00000468211 WTIPA6NIX2 430 aaPredicted RBP31.41■■■□□ 2.62
PTCH1-210ENST00000468211 PAXIP1Q6ZW49 1069 aaPredicted RBP31.41■■■□□ 2.62
PTCH1-210ENST00000468211 AIDAQ96BJ3 306 aa31.41■■■□□ 2.62
PTCH1-210ENST00000468211 GRM1Q13255 1194 aa31.4■■■□□ 2.62
PTCH1-210ENST00000468211 GREM2Q9H772 168 aa31.4■■■□□ 2.62
PTCH1-210ENST00000468211 H7C1W4 665 aa31.39■■■□□ 2.62
PTCH1-210ENST00000468211 CTCFP49711 727 aaPredicted RBP31.39■■■□□ 2.62
PTCH1-210ENST00000468211 FLIIQ13045 1269 aa31.39■■■□□ 2.62
PTCH1-210ENST00000468211 CDC37L1Q7L3B6 337 aa31.39■■■□□ 2.62
PTCH1-210ENST00000468211 UBE3BQ7Z3V4 1068 aa31.39■■■□□ 2.62
PTCH1-210ENST00000468211 VIL1P09327 827 aaKnown RBP31.38■■■□□ 2.61
PTCH1-210ENST00000468211 RPS12P25398 132 aaKnown RBP31.38■■■□□ 2.61
PTCH1-210ENST00000468211 SAPCD2Q86UD0 394 aa31.38■■■□□ 2.61
PTCH1-210ENST00000468211 USP48Q86UV5 1035 aa31.38■■■□□ 2.61
PTCH1-210ENST00000468211 XDHP47989 1333 aa31.38■■■□□ 2.61
PTCH1-210ENST00000468211 VAMP4O75379 141 aa31.37■■■□□ 2.61
PTCH1-210ENST00000468211 LBX1P52954 281 aa31.37■■■□□ 2.61
PTCH1-210ENST00000468211 RBM26Q5T8P6 1007 aaKnown RBP31.37■■■□□ 2.61
PTCH1-210ENST00000468211 WDR63Q8IWG1 891 aa31.37■■■□□ 2.61
PTCH1-210ENST00000468211 ZNF408Q9H9D4 720 aa31.37■■■□□ 2.61
PTCH1-210ENST00000468211 SPINK5Q9NQ38 1064 aaPredicted RBP31.37■■■□□ 2.61
PTCH1-210ENST00000468211 PRDM10Q9NQV6 1147 aa31.37■■■□□ 2.61
PTCH1-210ENST00000468211 EXOSC9Q06265 439 aaKnown RBP31.36■■■□□ 2.61
PTCH1-210ENST00000468211 CDC5LQ99459 802 aaKnown RBP31.36■■■□□ 2.61
PTCH1-210ENST00000468211 G3V3G9 751 aa31.35■■■□□ 2.61
PTCH1-210ENST00000468211 ECE1P42892 770 aa31.35■■■□□ 2.61
PTCH1-210ENST00000468211 MAP2K1Q02750 393 aaPredicted RBP31.35■■■□□ 2.61
PTCH1-210ENST00000468211 GCKRQ14397 625 aa31.35■■■□□ 2.61
PTCH1-210ENST00000468211 DCAF8Q5TAQ9 597 aa31.35■■■□□ 2.61
PTCH1-210ENST00000468211 AOC2O75106 756 aa31.34■■■□□ 2.61
PTCH1-210ENST00000468211 HSPA8P11142 646 aaKnown RBP31.34■■■□□ 2.61
PTCH1-210ENST00000468211 FKBP5Q13451 457 aaPredicted RBP31.34■■■□□ 2.61
PTCH1-210ENST00000468211 MINPP1Q9UNW1 487 aa31.34■■■□□ 2.61
PTCH1-210ENST00000468211 ZNF646O15015 1829 aaPredicted RBP31.33■■■□□ 2.61
PTCH1-210ENST00000468211 ATP2B4P23634 1241 aa31.33■■■□□ 2.61
PTCH1-210ENST00000468211 CASP7P55210 303 aa31.33■■■□□ 2.61
PTCH1-210ENST00000468211 DNAAF4Q8WXU2 420 aa31.33■■■□□ 2.61
PTCH1-210ENST00000468211 BSDC1Q9NW68 430 aaPredicted RBP31.33■■■□□ 2.61
PTCH1-210ENST00000468211 ASTN2O75129 1339 aaPredicted RBP31.31■■■□□ 2.6
PTCH1-210ENST00000468211 KIF4BQ2VIQ3 1234 aa31.31■■■□□ 2.6
PTCH1-210ENST00000468211 KRT26Q7Z3Y9 468 aa31.31■■■□□ 2.6
PTCH1-210ENST00000468211 ADM5C9JUS6 153 aa31.3■■■□□ 2.6
PTCH1-210ENST00000468211 RSBN1LQ6PCB5 846 aaPredicted RBP31.3■■■□□ 2.6
PTCH1-210ENST00000468211 PLA2G12BQ9BX93 195 aa31.3■■■□□ 2.6
PTCH1-210ENST00000468211 ZNF609O15014 1411 aa31.3■■■□□ 2.6
PTCH1-210ENST00000468211 LINS1Q8NG48 757 aa31.29■■■□□ 2.6
PTCH1-210ENST00000468211 FAM161AQ3B820 660 aa31.28■■■□□ 2.6
PTCH1-210ENST00000468211 FAM9BQ8IZU0 186 aa31.28■■■□□ 2.6
PTCH1-210ENST00000468211 HHIPL1Q96JK4 782 aa31.28■■■□□ 2.6
PTCH1-210ENST00000468211 GMLQ99445 158 aa31.28■■■□□ 2.6
PTCH1-210ENST00000468211 F6X3S4 739 aa31.27■■■□□ 2.6
PTCH1-210ENST00000468211 CCT4P50991 539 aaKnown RBP31.27■■■□□ 2.6
PTCH1-210ENST00000468211 ZNF280AP59817 542 aaPredicted RBP31.27■■■□□ 2.6
PTCH1-210ENST00000468211 DCPSQ96C86 337 aaKnown RBP31.27■■■□□ 2.6
PTCH1-210ENST00000468211 MED23Q9ULK4 1368 aa31.27■■■□□ 2.6
PTCH1-210ENST00000468211 CSF1RP07333 972 aa31.26■■■□□ 2.59
PTCH1-210ENST00000468211 ITGA6P23229 1130 aa31.26■■■□□ 2.59
PTCH1-210ENST00000468211 MAP2K2P36507 400 aa31.26■■■□□ 2.59
PTCH1-210ENST00000468211 AGBL3Q8NEM8 1001 aa31.26■■■□□ 2.59
PTCH1-210ENST00000468211 MYH16Q9H6N6 1097 aa31.26■■■□□ 2.59
PTCH1-210ENST00000468211 GGA3Q9NZ52 723 aa31.26■■■□□ 2.59
PTCH1-210ENST00000468211 PODNQ7Z5L7 613 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms