RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 BTLAQ7Z6A9 289 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 FMR1NBQ8N0W7 255 aaPredicted RBP7.09□□□□□ -1.27
SSR3-204ENST00000467733 ZNF280CQ8ND82 737 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 USP21Q9UK80 565 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 KIAA1024Q9UPX6 916 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 RBM19Q9Y4C8 960 aaKnown RBP7.09□□□□□ -1.27
SSR3-204ENST00000467733 NCOA1Q15788 1441 aa7.09□□□□□ -1.28
SSR3-204ENST00000467733 KDM5CP41229 1560 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 PALM3A6NDB9 673 aaPredicted RBP7.08□□□□□ -1.28
SSR3-204ENST00000467733 ZBTB7BO15156 539 aaPredicted RBP7.08□□□□□ -1.28
SSR3-204ENST00000467733 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
SSR3-204ENST00000467733 PCSK7Q16549 785 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 ALDH16A1Q8IZ83 802 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 STAG2Q8N3U4 1231 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 TP53INP1Q96A56 240 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 PNMA5Q96PV4 448 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 DIP2CQ9Y2E4 1556 aa7.08□□□□□ -1.28
SSR3-204ENST00000467733 ZNF142P52746 1687 aaPredicted RBP7.07□□□□□ -1.28
SSR3-204ENST00000467733 AFF1P51825 1210 aaKnown RBP7.07□□□□□ -1.28
SSR3-204ENST00000467733 CLDN10P78369 228 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 IER5Q5VY09 327 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 PSAPL1Q6NUJ1 521 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 SIX5Q8N196 739 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 DTWD1Q8N5C7 304 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 IGFLR1Q9H665 355 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 DNAJB12Q9NXW2 375 aaKnown RBP7.07□□□□□ -1.28
SSR3-204ENST00000467733 SCAPERQ9BY12 1400 aa7.07□□□□□ -1.28
SSR3-204ENST00000467733 SUPT6HQ7KZ85 1726 aaKnown RBP7.07□□□□□ -1.28
SSR3-204ENST00000467733 MROH2AA6NES4 1674 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 ZNF518AQ6AHZ1 1483 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 ABCA6Q8N139 1617 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 RGS9O75916 674 aaPredicted RBP7.06□□□□□ -1.28
SSR3-204ENST00000467733 CEBPAP49715 358 aaPredicted RBP7.06□□□□□ -1.28
SSR3-204ENST00000467733 OGFOD1Q8N543 542 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 KRTAP4-12Q9BQ66 201 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.06□□□□□ -1.28
SSR3-204ENST00000467733 AGLP35573 1532 aa7.06□□□□□ -1.28
SSR3-204ENST00000467733 CAMSAP1Q5T5Y3 1602 aa7.05□□□□□ -1.28
SSR3-204ENST00000467733 PLCH2O75038 1416 aa7.05□□□□□ -1.28
SSR3-204ENST00000467733 HYAL3O43820 417 aaPredicted RBP7.05□□□□□ -1.28
SSR3-204ENST00000467733 RAD21O60216 631 aa7.05□□□□□ -1.28
SSR3-204ENST00000467733 EPB42P16452 691 aa7.05□□□□□ -1.28
SSR3-204ENST00000467733 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
SSR3-204ENST00000467733 TSEN2Q8NCE0 465 aaKnown RBP7.05□□□□□ -1.28
SSR3-204ENST00000467733 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
SSR3-204ENST00000467733 NAGPAQ9UK23 515 aa7.05□□□□□ -1.28
SSR3-204ENST00000467733 ATP9BO43861 1147 aa7.04□□□□□ -1.28
SSR3-204ENST00000467733 CCINQ13939 588 aa7.04□□□□□ -1.28
SSR3-204ENST00000467733 C2orf49Q9BVC5 232 aaPredicted RBP7.04□□□□□ -1.28
SSR3-204ENST00000467733 GSX2Q9BZM3 304 aa7.04□□□□□ -1.28
SSR3-204ENST00000467733 FRRS1LQ9P0K9 344 aa7.04□□□□□ -1.28
SSR3-204ENST00000467733 TRAPPC8Q9Y2L5 1435 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 CDK13Q14004 1512 aaKnown RBP7.03□□□□□ -1.28
SSR3-204ENST00000467733 MYO3AQ8NEV4 1616 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 PLEKHD1A6NEE1 506 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 TGFBR3LH3BV60 316 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 C21orf2O43822 256 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 NFKB1P19838 968 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 RTN1Q16799 776 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
SSR3-204ENST00000467733 DMRTC2Q8IXT2 367 aaPredicted RBP7.03□□□□□ -1.28
SSR3-204ENST00000467733 MKRN1Q9UHC7 482 aaKnown RBP7.03□□□□□ -1.28
SSR3-204ENST00000467733 NPATQ14207 1427 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 CNTLNQ9NXG0 1405 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 KIF14Q15058 1648 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 UBAP1LF5GYI3 381 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 FAM35AQ86V20 835 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 FBXO11Q86XK2 927 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 ZNF594Q96JF6 807 aaPredicted RBP7.02□□□□□ -1.29
SSR3-204ENST00000467733 RNF112Q9ULX5 631 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 ATAD2Q6PL18 1390 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 PLA2R1Q13018 1463 aa7.02□□□□□ -1.29
SSR3-204ENST00000467733 ITSN2Q9NZM3 1697 aa7.01□□□□□ -1.29
SSR3-204ENST00000467733 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
SSR3-204ENST00000467733 NGLY1Q96IV0 654 aa7.01□□□□□ -1.29
SSR3-204ENST00000467733 UCN2Q96RP3 112 aa7.01□□□□□ -1.29
SSR3-204ENST00000467733 POLR1AO95602 1720 aaPredicted RBP7.01□□□□□ -1.29
SSR3-204ENST00000467733 ZNF335Q9H4Z2 1342 aaPredicted RBP7.01□□□□□ -1.29
SSR3-204ENST00000467733 KIDINS220Q9ULH0 1771 aa7□□□□□ -1.29
SSR3-204ENST00000467733 CEP170BQ9Y4F5 1589 aaPredicted RBP7□□□□□ -1.29
SSR3-204ENST00000467733 TCOF1Q13428 1488 aaKnown RBP7□□□□□ -1.29
SSR3-204ENST00000467733 MLH3Q9UHC1 1453 aa7□□□□□ -1.29
SSR3-204ENST00000467733 SEC13P55735 322 aa7□□□□□ -1.29
SSR3-204ENST00000467733 FLIIQ13045 1269 aa7□□□□□ -1.29
SSR3-204ENST00000467733 WFDC8Q8IUA0 241 aa7□□□□□ -1.29
SSR3-204ENST00000467733 ADAMTS19Q8TE59 1207 aa7□□□□□ -1.29
SSR3-204ENST00000467733 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
SSR3-204ENST00000467733 SCG3Q8WXD2 468 aaKnown RBP7□□□□□ -1.29
SSR3-204ENST00000467733 POM121Q96HA1 1249 aa7□□□□□ -1.29
SSR3-204ENST00000467733 C11orf16Q9NQ32 467 aa7□□□□□ -1.29
SSR3-204ENST00000467733 CDC42BPBQ9Y5S2 1711 aa7□□□□□ -1.29
SSR3-204ENST00000467733 ARHGAP5Q13017 1502 aa7□□□□□ -1.29
SSR3-204ENST00000467733 PREX2Q70Z35 1606 aa6.99□□□□□ -1.29
SSR3-204ENST00000467733 ARID4AP29374 1257 aaPredicted RBP6.99□□□□□ -1.29
SSR3-204ENST00000467733 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
SSR3-204ENST00000467733 IGF2-ASQ6U949 168 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms