RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
ATG4B-214ENST00000465399 CCDC191Q8NCU4 936 aa18.35■□□□□ 0.53
ATG4B-214ENST00000465399 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
ATG4B-214ENST00000465399 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
ATG4B-214ENST00000465399 DOK7Q18PE1 504 aa18.34■□□□□ 0.53
ATG4B-214ENST00000465399 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
ATG4B-214ENST00000465399 TBC1D10BQ4KMP7 808 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-214ENST00000465399 SAMD7Q7Z3H4 446 aa18.34■□□□□ 0.53
ATG4B-214ENST00000465399 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
ATG4B-214ENST00000465399 ANKIB1Q9P2G1 1089 aa18.34■□□□□ 0.53
ATG4B-214ENST00000465399 RTL9Q8NET4 1388 aa18.33■□□□□ 0.53
ATG4B-214ENST00000465399 G3V3G9 751 aa18.33■□□□□ 0.52
ATG4B-214ENST00000465399 CA12O43570 354 aa18.33■□□□□ 0.52
ATG4B-214ENST00000465399 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-214ENST00000465399 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
ATG4B-214ENST00000465399 CCDC30Q5VVM6 783 aa18.33■□□□□ 0.52
ATG4B-214ENST00000465399 USP48Q86UV5 1035 aa18.33■□□□□ 0.52
ATG4B-214ENST00000465399 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-214ENST00000465399 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
ATG4B-214ENST00000465399 CASP8AP2Q9UKL3 1982 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 PDE8AO60658 829 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 UFL1O94874 794 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-214ENST00000465399 KRT26Q7Z3Y9 468 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 ABHD8Q96I13 439 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 GGA1Q9UJY5 639 aa18.32■□□□□ 0.52
ATG4B-214ENST00000465399 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
ATG4B-214ENST00000465399 DCPSQ96C86 337 aaKnown RBP18.31■□□□□ 0.52
ATG4B-214ENST00000465399 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-214ENST00000465399 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
ATG4B-214ENST00000465399 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
ATG4B-214ENST00000465399 AKAP11Q9UKA4 1901 aa18.3■□□□□ 0.52
ATG4B-214ENST00000465399 EGFRP00533 1210 aa18.3■□□□□ 0.52
ATG4B-214ENST00000465399 HUNKP57058 714 aa18.3■□□□□ 0.52
ATG4B-214ENST00000465399 KIF4BQ2VIQ3 1234 aa18.3■□□□□ 0.52
ATG4B-214ENST00000465399 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
ATG4B-214ENST00000465399 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
ATG4B-214ENST00000465399 NOGQ13253 232 aa18.29■□□□□ 0.52
ATG4B-214ENST00000465399 ANKRD18AQ8IVF6 992 aa18.29■□□□□ 0.52
ATG4B-214ENST00000465399 CCDC85AQ96PX6 553 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-214ENST00000465399 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
ATG4B-214ENST00000465399 XDHP47989 1333 aa18.28■□□□□ 0.52
ATG4B-214ENST00000465399 C2orf69Q8N8R5 385 aa18.28■□□□□ 0.52
ATG4B-214ENST00000465399 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-214ENST00000465399 GBA2Q9HCG7 927 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-214ENST00000465399 MAP3K2Q9Y2U5 619 aa18.28■□□□□ 0.52
ATG4B-214ENST00000465399 ZNF609O15014 1411 aa18.28■□□□□ 0.52
ATG4B-214ENST00000465399 ADM5C9JUS6 153 aa18.27■□□□□ 0.52
ATG4B-214ENST00000465399 DLK2Q6UY11 383 aa18.27■□□□□ 0.52
ATG4B-214ENST00000465399 SULF1Q8IWU6 871 aa18.27■□□□□ 0.52
ATG4B-214ENST00000465399 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
ATG4B-214ENST00000465399 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
ATG4B-214ENST00000465399 CTSWP56202 376 aa18.26■□□□□ 0.51
ATG4B-214ENST00000465399 NEXNQ0ZGT2 675 aa18.26■□□□□ 0.51
ATG4B-214ENST00000465399 RGMBQ6NW40 437 aa18.26■□□□□ 0.51
ATG4B-214ENST00000465399 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
ATG4B-214ENST00000465399 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
ATG4B-214ENST00000465399 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
ATG4B-214ENST00000465399 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
ATG4B-214ENST00000465399 PI4KAP2A4QPH2 592 aa18.25■□□□□ 0.51
ATG4B-214ENST00000465399 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
ATG4B-214ENST00000465399 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-214ENST00000465399 PI4KAP1Q8N8J0 262 aa18.25■□□□□ 0.51
ATG4B-214ENST00000465399 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
ATG4B-214ENST00000465399 CCDC102AQ96A19 550 aa18.24■□□□□ 0.51
ATG4B-214ENST00000465399 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-214ENST00000465399 CCDC85CA6NKD9 419 aa18.23■□□□□ 0.51
ATG4B-214ENST00000465399 IGKV5-2P06315 115 aa18.23■□□□□ 0.51
ATG4B-214ENST00000465399 ZNF157P51786 506 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-214ENST00000465399 ZNF280AP59817 542 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-214ENST00000465399 PODNQ7Z5L7 613 aa18.23■□□□□ 0.51
ATG4B-214ENST00000465399 PAPPA2Q9BXP8 1791 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 SCARF1Q14162 830 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-214ENST00000465399 ANGEL2Q5VTE6 544 aaKnown RBP18.22■□□□□ 0.51
ATG4B-214ENST00000465399 TTLL11Q8NHH1 800 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 CDCA5Q96FF9 252 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 ZIC5Q96T25 663 aa18.22■□□□□ 0.51
ATG4B-214ENST00000465399 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-214ENST00000465399 ASTN2O75129 1339 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-214ENST00000465399 USP17L3A6NCW0 530 aa18.21■□□□□ 0.51
ATG4B-214ENST00000465399 USP17L4A6NCW7 530 aa18.21■□□□□ 0.51
ATG4B-214ENST00000465399 FAM155AB1AL88 458 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-214ENST00000465399 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.51
ATG4B-214ENST00000465399 USP17L1Q7RTZ2 530 aa18.21■□□□□ 0.51
ATG4B-214ENST00000465399 GREM2Q9H772 168 aa18.21■□□□□ 0.51
ATG4B-214ENST00000465399 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
ATG4B-214ENST00000465399 NEURL1BA8MQ27 555 aa18.2■□□□□ 0.5
ATG4B-214ENST00000465399 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
ATG4B-214ENST00000465399 GMLQ99445 158 aa18.2■□□□□ 0.5
ATG4B-214ENST00000465399 MCOLN1Q9GZU1 580 aa18.2■□□□□ 0.5
ATG4B-214ENST00000465399 SAGE1Q9NXZ1 904 aa18.2■□□□□ 0.5
ATG4B-214ENST00000465399 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
ATG4B-214ENST00000465399 KIF23Q02241 960 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-214ENST00000465399 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
ATG4B-214ENST00000465399 UBE3BQ7Z3V4 1068 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms