RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 CACNA1FO60840 1977 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 SCN4AP35499 1836 aa16.98■□□□□ 0.31
COMMD3-205ENST00000463688 GRM8O00222 908 aa16.98■□□□□ 0.31
COMMD3-205ENST00000463688 CSF1RP07333 972 aa16.98■□□□□ 0.31
COMMD3-205ENST00000463688 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
COMMD3-205ENST00000463688 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
COMMD3-205ENST00000463688 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-205ENST00000463688 TAF7LQ5H9L4 462 aa16.97■□□□□ 0.31
COMMD3-205ENST00000463688 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
COMMD3-205ENST00000463688 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
COMMD3-205ENST00000463688 ITGA6P23229 1130 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 KCNJ4P48050 445 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 SCNN1DP51172 638 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
COMMD3-205ENST00000463688 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 GREM2Q9H772 168 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 CACNA1SQ13698 1873 aa16.96■□□□□ 0.31
COMMD3-205ENST00000463688 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.3
COMMD3-205ENST00000463688 ECE2O60344 883 aa16.96■□□□□ 0.3
COMMD3-205ENST00000463688 RAD17O75943 681 aa16.96■□□□□ 0.3
COMMD3-205ENST00000463688 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.3
COMMD3-205ENST00000463688 MINPP1Q9UNW1 487 aa16.96■□□□□ 0.3
COMMD3-205ENST00000463688 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
COMMD3-205ENST00000463688 GMPSP49915 693 aaPredicted RBP16.95■□□□□ 0.3
COMMD3-205ENST00000463688 DNAJC5GQ8N7S2 189 aa16.95■□□□□ 0.3
COMMD3-205ENST00000463688 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
COMMD3-205ENST00000463688 CEP350Q5VT06 3117 aa16.94■□□□□ 0.3
COMMD3-205ENST00000463688 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
COMMD3-205ENST00000463688 JARID2Q92833 1246 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-205ENST00000463688 COA1Q9GZY4 146 aa16.94■□□□□ 0.3
COMMD3-205ENST00000463688 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
COMMD3-205ENST00000463688 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
COMMD3-205ENST00000463688 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
COMMD3-205ENST00000463688 MYO3BQ8WXR4 1341 aa16.94■□□□□ 0.3
COMMD3-205ENST00000463688 F6X3S4 739 aa16.93■□□□□ 0.3
COMMD3-205ENST00000463688 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
COMMD3-205ENST00000463688 EPS15P42566 896 aa16.93■□□□□ 0.3
COMMD3-205ENST00000463688 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
COMMD3-205ENST00000463688 CASP7P55210 303 aa16.93■□□□□ 0.3
COMMD3-205ENST00000463688 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
COMMD3-205ENST00000463688 DBNDD1Q9H9R9 158 aa16.93■□□□□ 0.3
COMMD3-205ENST00000463688 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
COMMD3-205ENST00000463688 USP17L3A6NCW0 530 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 USP17L4A6NCW7 530 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 VIL1P09327 827 aaKnown RBP16.92■□□□□ 0.3
COMMD3-205ENST00000463688 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
COMMD3-205ENST00000463688 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 USP17L1Q7RTZ2 530 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
COMMD3-205ENST00000463688 OGFOD1Q8N543 542 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 JMYQ8N9B5 988 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
COMMD3-205ENST00000463688 PSMD14O00487 310 aa16.91■□□□□ 0.3
COMMD3-205ENST00000463688 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
COMMD3-205ENST00000463688 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
COMMD3-205ENST00000463688 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
COMMD3-205ENST00000463688 LAMB2P55268 1798 aa16.91■□□□□ 0.3
COMMD3-205ENST00000463688 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
COMMD3-205ENST00000463688 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 MICALL2Q8IY33 904 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 PGAP2Q9UHJ9 254 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 ZNF804BA4D1E1 1349 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
COMMD3-205ENST00000463688 YDJCA8MPS7 323 aa16.89■□□□□ 0.29
COMMD3-205ENST00000463688 ECE1P42892 770 aa16.89■□□□□ 0.29
COMMD3-205ENST00000463688 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
COMMD3-205ENST00000463688 MAP1SQ66K74 1059 aaPredicted RBP16.89■□□□□ 0.29
COMMD3-205ENST00000463688 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
COMMD3-205ENST00000463688 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
COMMD3-205ENST00000463688 UTYO14607 1347 aa16.89■□□□□ 0.29
COMMD3-205ENST00000463688 LRRC37AA6NMS7 1700 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 POTEIP0CG38 1075 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 POTEJP0CG39 1038 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 FOXO4P98177 505 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 C15orf52Q6ZUT6 534 aaKnown RBP16.88■□□□□ 0.29
COMMD3-205ENST00000463688 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 DCPSQ96C86 337 aaKnown RBP16.88■□□□□ 0.29
COMMD3-205ENST00000463688 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 ZNF609O15014 1411 aa16.88■□□□□ 0.29
COMMD3-205ENST00000463688 USP17L8P0C7I0 530 aa16.87■□□□□ 0.29
COMMD3-205ENST00000463688 ZNF804AQ7Z570 1209 aa16.87■□□□□ 0.29
COMMD3-205ENST00000463688 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
COMMD3-205ENST00000463688 CHRNDQ07001 517 aa16.87■□□□□ 0.29
COMMD3-205ENST00000463688 DEFB115Q30KQ5 88 aa16.87■□□□□ 0.29
COMMD3-205ENST00000463688 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
COMMD3-205ENST00000463688 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
COMMD3-205ENST00000463688 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-205ENST00000463688 UBE4AQ14139 1066 aa16.85■□□□□ 0.29
COMMD3-205ENST00000463688 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
COMMD3-205ENST00000463688 HHIPL1Q96JK4 782 aa16.85■□□□□ 0.29
COMMD3-205ENST00000463688 FBXO3Q9UK99 471 aa16.85■□□□□ 0.29
COMMD3-205ENST00000463688 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-205ENST00000463688 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
COMMD3-205ENST00000463688 RASSF10A6NK89 507 aa16.84■□□□□ 0.29
COMMD3-205ENST00000463688 KIF4BQ2VIQ3 1234 aa16.84■□□□□ 0.29
COMMD3-205ENST00000463688 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms