RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 RIC3Q7Z5B4 369 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 A0A0G2JLW4 131 aa13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 MRC1P22897 1456 aa13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 TFCP2Q12800 502 aa13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 CCAR1Q8IX12 1150 aaKnown RBP13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
PDZRN3-203ENST00000462146 PDIA4P13667 645 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 MYD88Q99836 296 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 GOLGA6L19H0YKK7 550 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 CEP135Q66GS9 1140 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 ZNF142P52746 1687 aaPredicted RBP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 APOBRQ0VD83 1088 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
PDZRN3-203ENST00000462146 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 NSUN7Q8NE18 718 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 NCOA5Q9HCD5 579 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 CDC25BP30305 580 aa13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 TNNI3KQ59H18 835 aa13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 FPGT-TNNI3KV9GXZ4 949 aa13.79□□□□□ -0.2
PDZRN3-203ENST00000462146 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 FGD1P98174 961 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 GCKRQ14397 625 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 HDAC5Q9UQL6 1122 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 SKILP12757 684 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 CCZ1BP86790 482 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 CCZ1P86791 482 aaPredicted RBP13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 KRT32Q14532 448 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 STX1AQ16623 288 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 CFAP45Q9UL16 551 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 ZNF215Q9UL58 517 aaPredicted RBP13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 PAXBP1Q9Y5B6 917 aa13.78□□□□□ -0.2
PDZRN3-203ENST00000462146 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 CCDC69A6NI79 296 aa13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 ATP5JP18859 108 aa13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 RFX5P48382 616 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 PTPN12Q05209 780 aaKnown RBP13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 SARM1Q6SZW1 724 aa13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 ZSCAN16Q9H4T2 348 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 OGFRQ9NZT2 677 aa13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-203ENST00000462146 AMOTQ4VCS5 1084 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 COPS6Q7L5N1 327 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 FEZ1Q99689 392 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 PSME1Q06323 249 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 SYCP1Q15431 976 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 ANKRD24Q8TF21 1146 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 MRFAP1L1Q96HT8 127 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
PDZRN3-203ENST00000462146 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 BECN2A8MW95 431 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 PFKFB2O60825 505 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 ERBB3P21860 1342 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 RBM6P78332 1123 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 FSIP1Q8NA03 581 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 DDX41Q9UJV9 622 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 PHRF1Q9P1Y6 1649 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-203ENST00000462146 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 PTPN14Q15678 1187 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 UBE3BQ7Z3V4 1068 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 CCDC73Q6ZRK6 1079 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 KIF18AQ8NI77 898 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 COPRSQ9NQ92 184 aa13.75□□□□□ -0.21
PDZRN3-203ENST00000462146 ATP5J2-PTCD1G3V325 749 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 KINO60870 393 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 ME1P48163 572 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 OTUD7BQ6GQQ9 843 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms