RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ZEB2O60315 1214 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 NBPF7P0C2Y1 421 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-203ENST00000456367 RHOXF2BP0C7M4 288 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 AK2P54819 239 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 ERCC6LQ2NKX8 1250 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 TTC39AQ5SRH9 613 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 SULT6B1Q6IMI4 303 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 TMTC1Q8IUR5 882 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 C17orf53Q8N3J3 647 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-203ENST00000456367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.69□□□□□ -1.5
PCDH9-203ENST00000456367 GPT2Q8TD30 523 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 LMBR1Q8WVP7 490 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 LRRC45Q96CN5 670 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 RHOXF2Q9BQY4 288 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 ERBB4Q15303 1308 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 ERCC6Q03468 1493 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 CHMLP26374 656 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 AMPD3Q01432 767 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 SEPT6Q14141 434 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 SETDB1Q15047 1291 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 KLHL10Q6JEL2 608 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 LTV1Q96GA3 475 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-203ENST00000456367 TM6SF1Q9BZW5 370 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 LRRC27Q9C0I9 530 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 TMX1Q9H3N1 280 aa5.69□□□□□ -1.5
PCDH9-203ENST00000456367 ORC3Q9UBD5 711 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-203ENST00000456367 PUF60Q9UHX1 559 aaKnown RBP5.69□□□□□ -1.5
PCDH9-203ENST00000456367 UGGT2Q9NYU1 1516 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 AKR1B10O60218 316 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 LMOD1P29536 600 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ATP5DP30049 168 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 PPP1R2P41236 205 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ATP8B2P98198 1209 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC40Q4G0X9 1142 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 PLEKHO1Q53GL0 409 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 FEZ2Q9UHY8 353 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ARHGAP5Q13017 1502 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 RAD21O60216 631 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 PPP1R12BO60237 982 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 RUFY3Q7L099 469 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 IFT20Q8IY31 132 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 CEP120Q8N960 986 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 TSC1Q92574 1164 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 SECISBP2LQ93073 1101 aaKnown RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 IQCDQ96DY2 449 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 GEMIN8Q9NWZ8 242 aaKnown RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 TSKSQ9UJT2 592 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 CAPN7Q9Y6W3 813 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 KDM5DQ9BY66 1539 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 SNAPC4Q5SXM2 1469 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 RAD54L2Q9Y4B4 1467 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 NUTM2FA1L443 756 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ZSCAN20P17040 1043 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 FANCCQ00597 558 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 SSRP1Q08945 709 aaKnown RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 SNCBQ16143 134 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 NUTM2GQ5VZR2 741 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ARMC9Q7Z3E5 817 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 BRF1Q92994 677 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 PLVAPQ9BX97 442 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ACTR5Q9H9F9 607 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ZBTB7BO15156 539 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 STAMBPO95630 424 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 KRT18P05783 430 aaKnown RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 ALDH3A1P30838 453 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 MTIF2P46199 727 aaKnown RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 NLRP12P59046 1061 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 IRX5P78411 483 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 TRMT2AQ8IZ69 625 aaKnown RBP5.68□□□□□ -1.5
PCDH9-203ENST00000456367 CC2D2AQ9P2K1 1620 aa5.68□□□□□ -1.5
PCDH9-203ENST00000456367 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CYP26C1Q6V0L0 522 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 MLKLQ8NB16 471 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 UBAC1Q9BSL1 405 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 MYO1AQ9UBC5 1043 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 SPG7Q9UQ90 795 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 SPATA31E1Q6ZUB1 1445 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 PCK1P35558 622 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 SLC20A2Q08357 652 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 NCBP1Q09161 790 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 PAK2Q13177 524 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 KIAA0753Q2KHM9 967 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 RHPN1Q8TCX5 695 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 GOPCQ9HD26 462 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 PYCARDQ9ULZ3 195 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 RBM8AQ9Y5S9 174 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 USP16Q9Y5T5 823 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 ANKRD62A6NC57 917 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 GOLGA8BA8MQT2 603 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CHUKO15111 745 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 IARSP41252 1262 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 KARSQ15046 597 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC96Q2M329 555 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 TDRD12Q587J7 1177 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 NAA16Q6N069 864 aaPredicted RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CAPS2Q9BXY5 557 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 RAB34Q9BZG1 259 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms