RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 A0A0G2JLW4 131 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 SRGNP10124 158 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 KCNA3P22001 575 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 HOXA10P31260 410 aaPredicted RBP9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 CTSWP56202 376 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 RABL6Q3YEC7 729 aaPredicted RBP9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 LMBR1LQ6UX01 489 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 FHDC1Q9C0D6 1143 aaPredicted RBP9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 C10orf71Q711Q0 1435 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 NPR1P16066 1061 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 DPEP1P16444 411 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 CHRNA5P30532 468 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 EXOC6Q8TAG9 804 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 RPGRQ92834 1020 aaKnown RBP9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 MASTLQ96GX5 879 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 SYT17Q9BSW7 474 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 C1orf115Q9H7X2 142 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 RIC1Q4ADV7 1423 aa9.44□□□□□ -0.9
AC004540.1-206ENST00000448056 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 PPP1R37O75864 691 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 ALDH1B1P30837 517 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 IRX5P78411 483 aaPredicted RBP9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 ATP8B2P98198 1209 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 AAMPQ13685 434 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 STYK1Q6J9G0 422 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 NLGN2Q8NFZ4 835 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 CRAMP1Q96RY5 1269 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 GREM2Q9H772 168 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
AC004540.1-206ENST00000448056 RTL9Q8NET4 1388 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 ANKRD18BA2A2Z9 1011 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 BBOX1O75936 387 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 ITGA6P23229 1130 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 RPS8P62241 208 aaKnown RBP9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 IFIT5Q13325 482 aaKnown RBP9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 MTX1Q13505 466 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 CCDC57Q2TAC2 916 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 CNKSR1Q969H4 720 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 CHMP3Q9Y3E7 222 aa9.42□□□□□ -0.9
AC004540.1-206ENST00000448056 PNMA6EA0A0J9YXQ4 647 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 SRGAP3O43295 1099 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 RFX5P48382 616 aaPredicted RBP9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 GRAPQ13588 217 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 CEP85Q6P2H3 762 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 SIRT2Q8IXJ6 389 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 TTLL6Q8N841 843 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 CELF1Q92879 486 aaKnown RBP9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 OCEL1Q9H607 264 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 N4BP2Q86UW6 1770 aaPredicted RBP9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 LRP5O75197 1615 aa9.41□□□□□ -0.9
AC004540.1-206ENST00000448056 NEFLP07196 543 aa9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 C7P10643 843 aa9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 ANKRD18AQ8IVF6 992 aa9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 PDCD7Q8N8D1 485 aaKnown RBP9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 SSH3Q8TE77 659 aa9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 SLC39A7Q92504 469 aa9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 BSDC1Q9NW68 430 aaPredicted RBP9.4□□□□□ -0.9
AC004540.1-206ENST00000448056 DDX60Q8IY21 1712 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 PTPN12Q05209 780 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 TAF7LQ5H9L4 462 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 MPHOSPH8Q99549 860 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 TNRC6CQ9HCJ0 1690 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-206ENST00000448056 KIF13BQ9NQT8 1826 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 PPEF1O14829 653 aaPredicted RBP9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 HMMRO75330 724 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 SP8Q8IXZ3 490 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 PUS3Q9BZE2 481 aaKnown RBP9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 ATP6V0A2Q9Y487 856 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 RIPOR2Q9Y4F9 1068 aa9.38□□□□□ -0.91
AC004540.1-206ENST00000448056 C21orf2O43822 256 aa9.37□□□□□ -0.91
AC004540.1-206ENST00000448056 LRRC24Q50LG9 513 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms