RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 KCNF1Q9H3M0 494 aa16.03■□□□□ 0.16
HERPUD1-204ENST00000439977 GLIPR1L2Q4G1C9 344 aa16.03■□□□□ 0.16
HERPUD1-204ENST00000439977 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
HERPUD1-204ENST00000439977 HAUS7Q99871 368 aa16.03■□□□□ 0.16
HERPUD1-204ENST00000439977 TERF1P54274 439 aa16.02■□□□□ 0.16
HERPUD1-204ENST00000439977 SCAND2PQ9GZW5 306 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-204ENST00000439977 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.16
HERPUD1-204ENST00000439977 C1orf167Q5SNV9 1468 aa16.02■□□□□ 0.16
HERPUD1-204ENST00000439977 RABL6Q3YEC7 729 aaPredicted RBP16.02■□□□□ 0.15
HERPUD1-204ENST00000439977 SLIT3O75094 1523 aa16.02■□□□□ 0.15
HERPUD1-204ENST00000439977 TTLL5Q6EMB2 1281 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 PTGS1P23219 599 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 FOXO4P98177 505 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 KRT32Q14532 448 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 HSP90AB3PQ58FF7 597 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 DRC7Q8IY82 874 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 FBXW7Q969H0 707 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 DNAJC25Q9H1X3 360 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 CBX8Q9HC52 389 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 CASP7P55210 303 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 ATG9AQ7Z3C6 839 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 KBTBD3Q8NAB2 608 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 PAG1Q9NWQ8 432 aa16.01■□□□□ 0.15
HERPUD1-204ENST00000439977 FKBP4Q02790 459 aaKnown RBP eCLIP16■□□□□ 0.15
HERPUD1-204ENST00000439977 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
HERPUD1-204ENST00000439977 RGPD5Q99666 1765 aa16■□□□□ 0.15
HERPUD1-204ENST00000439977 RAB11FIP4Q86YS3 637 aa16■□□□□ 0.15
HERPUD1-204ENST00000439977 LRMPQ12912 555 aa15.99■□□□□ 0.15
HERPUD1-204ENST00000439977 RESTQ13127 1097 aa15.99■□□□□ 0.15
HERPUD1-204ENST00000439977 ELP1O95163 1332 aa15.99■□□□□ 0.15
HERPUD1-204ENST00000439977 HAND2P61296 217 aa15.99■□□□□ 0.15
HERPUD1-204ENST00000439977 TRIM5Q9C035 493 aa15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 CTDNEP1O95476 244 aa15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 CCDC186Q7Z3E2 898 aa15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 ZNF165P49910 485 aa15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 ALDH8A1Q9H2A2 487 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-204ENST00000439977 A0A1B0GUL7 405 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 IFIT1P09914 478 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 OTUD7BQ6GQQ9 843 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 DHX32Q7L7V1 743 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 C5P01031 1676 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 HSPD1P10809 573 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 TOM1L2Q6ZVM7 507 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 KIAA1524Q8TCG1 905 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 CLSTN2Q9H4D0 955 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 JCADQ9P266 1359 aa15.97■□□□□ 0.15
HERPUD1-204ENST00000439977 H7C1W4 665 aa15.96■□□□□ 0.15
HERPUD1-204ENST00000439977 NSUN7Q8NE18 718 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-204ENST00000439977 E7EWF7 191 aa15.96■□□□□ 0.15
HERPUD1-204ENST00000439977 DDX19AQ9NUU7 478 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-204ENST00000439977 ADORA1P30542 326 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 PI16Q6UXB8 463 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 TMEM94Q12767 1356 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 M0R2C6 588 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 USP28Q96RU2 1077 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 MAST3O60307 1309 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 OSBP2Q969R2 916 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 GJB4Q9NTQ9 266 aa15.95■□□□□ 0.14
HERPUD1-204ENST00000439977 CCAR1Q8IX12 1150 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 ZMYND15Q9H091 742 aa15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 GOLPH3LQ9H4A5 285 aa15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 PFKFB2O60825 505 aa15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 ADD1P35611 737 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 FAM89AQ96GI7 184 aa15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 SPTLC3Q9NUV7 552 aa15.94■□□□□ 0.14
HERPUD1-204ENST00000439977 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 EYA2O00167 538 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 ZMYM1Q5SVZ6 1142 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 STRN4Q9NRL3 753 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 IL15P40933 162 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 ME1P48163 572 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 SCARF1Q14162 830 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 C11orf57Q6ZUT1 292 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 ZCRB1Q8TBF4 217 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-204ENST00000439977 POLR3DP05423 398 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-204ENST00000439977 PDIA4P13667 645 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-204ENST00000439977 PDIA3P30101 505 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-204ENST00000439977 EXOSC10Q01780 885 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-204ENST00000439977 SH3TC1Q8TE82 1336 aa15.92■□□□□ 0.14
HERPUD1-204ENST00000439977 RNF113AO15541 343 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms