RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-218ENST00000439806 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-218ENST00000439806 NEK1Q96PY6 1258 aa12.43□□□□□ -0.42
CPNE1-218ENST00000439806 CDCA7Q9BWT1 371 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-218ENST00000439806 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
CPNE1-218ENST00000439806 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-218ENST00000439806 PDIA4P13667 645 aaKnown RBP12.42□□□□□ -0.42
CPNE1-218ENST00000439806 GPTP24298 496 aa12.42□□□□□ -0.42
CPNE1-218ENST00000439806 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
CPNE1-218ENST00000439806 NECAB1Q8N987 351 aa12.42□□□□□ -0.42
CPNE1-218ENST00000439806 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
CPNE1-218ENST00000439806 SEC62Q99442 399 aaKnown RBP12.42□□□□□ -0.42
CPNE1-218ENST00000439806 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
CPNE1-218ENST00000439806 A0A0G2JS52 829 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 ANKRD18BA2A2Z9 1011 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 VPS37CA5D8V6 355 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-218ENST00000439806 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
CPNE1-218ENST00000439806 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
CPNE1-218ENST00000439806 ZMYM1Q5SVZ6 1142 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 LRSAM1Q6UWE0 723 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 TMEM87AQ8NBN3 555 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-218ENST00000439806 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-218ENST00000439806 DSCC1Q9BVC3 393 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
CPNE1-218ENST00000439806 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 PHF14O94880 888 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 CSF1RP07333 972 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 PDCP20941 246 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 TOB2Q14106 344 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-218ENST00000439806 HLFQ16534 295 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 METTL24Q5JXM2 366 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 DZIP3Q86Y13 1208 aaKnown RBP12.4□□□□□ -0.42
CPNE1-218ENST00000439806 XAGE2Q96GT9 111 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
CPNE1-218ENST00000439806 MTMR6Q9Y217 621 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
CPNE1-218ENST00000439806 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.43
CPNE1-218ENST00000439806 RREB1Q92766 1687 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 SYCE3A1L190 88 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 IRS4O14654 1257 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 ADORA1P30542 326 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 CTSWP56202 376 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 FGD1P98174 961 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 Q6ZUG5 572 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 CNNM1Q9NRU3 951 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 THRAP3Q9Y2W1 955 aaKnown RBP12.39□□□□□ -0.43
CPNE1-218ENST00000439806 TAF6LQ9Y6J9 622 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 MYH15Q9Y2K3 1946 aa12.39□□□□□ -0.43
CPNE1-218ENST00000439806 MAST3O60307 1309 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 LAMB2P55268 1798 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-218ENST00000439806 FIBPO43427 364 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 PDE8AO60658 829 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-218ENST00000439806 ADAMTS2O95450 1211 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 CHGBP05060 677 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 CYP21A2P08686 494 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 ITGA6P23229 1130 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPNE1-218ENST00000439806 STK3Q13188 491 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 DDB1Q16531 1140 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
CPNE1-218ENST00000439806 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 AKAP11Q9UKA4 1901 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 UBE2HP62256 183 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 LRP5O75197 1615 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
CPNE1-218ENST00000439806 M0R2C6 588 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-218ENST00000439806 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
CPNE1-218ENST00000439806 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 SLFNL1Q499Z3 407 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
CPNE1-218ENST00000439806 GTF3C6Q969F1 213 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 PPP1R9BQ96SB3 815 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 GREM2Q9H772 168 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 CCDC87Q9NVE4 849 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1342.4 ms