RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 SPEF2Q9C093 1822 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 FANCIQ9NVI1 1328 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 UFL1O94874 794 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 CWF19L2Q2TBE0 894 aaKnown RBP28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 CST9Q5W186 159 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 GLIS2Q9BZE0 524 aaPredicted RBP28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 KCNQ5Q9NR82 932 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 SALL2Q9Y467 1007 aaPredicted RBP28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 PODXL2Q9NZ53 605 aa28.01■■■□□ 2.07
RPUSD3-206ENST00000433535 ANKIB1Q9P2G1 1089 aa28.01■■■□□ 2.07
RPUSD3-206ENST00000433535 THSD7BQ9C0I4 1608 aa28■■■□□ 2.07
RPUSD3-206ENST00000433535 WDR33Q9C0J8 1336 aaKnown RBP28■■■□□ 2.07
RPUSD3-206ENST00000433535 CTSWP56202 376 aa28■■■□□ 2.07
RPUSD3-206ENST00000433535 NEXNQ0ZGT2 675 aa28■■■□□ 2.07
RPUSD3-206ENST00000433535 PAXIP1Q6ZW49 1069 aaPredicted RBP28■■■□□ 2.07
RPUSD3-206ENST00000433535 SLC4A2P04920 1241 aa27.99■■■□□ 2.07
RPUSD3-206ENST00000433535 NEURL1BA8MQ27 555 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 H7C1D1 291 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 CAPN15O75808 1086 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 ANKRD18AQ8IVF6 992 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 AIDAQ96BJ3 306 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 PGAP2Q9UHJ9 254 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 GGA1Q9UJY5 639 aa27.98■■■□□ 2.07
RPUSD3-206ENST00000433535 CELF2O95319 508 aaKnown RBP27.97■■■□□ 2.07
RPUSD3-206ENST00000433535 GRM1Q13255 1194 aa27.97■■■□□ 2.07
RPUSD3-206ENST00000433535 NCBP3Q53F19 620 aaKnown RBP27.97■■■□□ 2.07
RPUSD3-206ENST00000433535 SAMD7Q7Z3H4 446 aa27.97■■■□□ 2.07
RPUSD3-206ENST00000433535 DPF2Q92785 391 aa27.97■■■□□ 2.07
RPUSD3-206ENST00000433535 ZC3H12CQ9C0D7 883 aaKnown RBP27.97■■■□□ 2.07
RPUSD3-206ENST00000433535 ZC3H15Q8WU90 426 aaKnown RBP27.96■■■□□ 2.07
RPUSD3-206ENST00000433535 CAPNS2Q96L46 248 aa27.96■■■□□ 2.07
RPUSD3-206ENST00000433535 WBP1LQ9NX94 342 aa27.96■■■□□ 2.07
RPUSD3-206ENST00000433535 TLL2Q9Y6L7 1015 aa27.96■■■□□ 2.07
RPUSD3-206ENST00000433535 EGFRP00533 1210 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 FLIIQ13045 1269 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 TBC1D10BQ4KMP7 808 aaPredicted RBP27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 CYP4F22Q6NT55 531 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 UBE3BQ7Z3V4 1068 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 TTLL11Q8NHH1 800 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 GREM2Q9H772 168 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 ZNF408Q9H9D4 720 aa27.95■■■□□ 2.06
RPUSD3-206ENST00000433535 XDHP47989 1333 aa27.94■■■□□ 2.06
RPUSD3-206ENST00000433535 CDC5LQ99459 802 aaKnown RBP27.94■■■□□ 2.06
RPUSD3-206ENST00000433535 PSME4Q14997 1843 aa27.93■■■□□ 2.06
RPUSD3-206ENST00000433535 G3V3G9 751 aa27.93■■■□□ 2.06
RPUSD3-206ENST00000433535 RPS12P25398 132 aaKnown RBP27.93■■■□□ 2.06
RPUSD3-206ENST00000433535 DCAF8Q5TAQ9 597 aa27.93■■■□□ 2.06
RPUSD3-206ENST00000433535 CTCFP49711 727 aaPredicted RBP27.92■■■□□ 2.06
RPUSD3-206ENST00000433535 FKBP5Q13451 457 aaPredicted RBP27.92■■■□□ 2.06
RPUSD3-206ENST00000433535 CDC37L1Q7L3B6 337 aa27.92■■■□□ 2.06
RPUSD3-206ENST00000433535 WDR63Q8IWG1 891 aa27.92■■■□□ 2.06
RPUSD3-206ENST00000433535 CACNA1FO60840 1977 aa27.91■■■□□ 2.06
RPUSD3-206ENST00000433535 ECE1P42892 770 aa27.91■■■□□ 2.06
RPUSD3-206ENST00000433535 EXOSC9Q06265 439 aaKnown RBP27.91■■■□□ 2.06
RPUSD3-206ENST00000433535 RBM26Q5T8P6 1007 aaKnown RBP27.91■■■□□ 2.06
RPUSD3-206ENST00000433535 DLK2Q6UY11 383 aa27.91■■■□□ 2.06
RPUSD3-206ENST00000433535 WTIPA6NIX2 430 aaPredicted RBP27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 H7C1W4 665 aa27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 VAMP4O75379 141 aa27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 GCKRQ14397 625 aa27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 SAPCD2Q86UD0 394 aa27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 USP48Q86UV5 1035 aa27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 DNAAF4Q8WXU2 420 aa27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 SPINK5Q9NQ38 1064 aaPredicted RBP27.9■■■□□ 2.06
RPUSD3-206ENST00000433535 VIL1P09327 827 aaKnown RBP27.89■■■□□ 2.06
RPUSD3-206ENST00000433535 LBX1P52954 281 aa27.89■■■□□ 2.06
RPUSD3-206ENST00000433535 MAP2K1Q02750 393 aaPredicted RBP27.89■■■□□ 2.06
RPUSD3-206ENST00000433535 PRDM10Q9NQV6 1147 aa27.89■■■□□ 2.06
RPUSD3-206ENST00000433535 ATP2B4P23634 1241 aa27.88■■■□□ 2.05
RPUSD3-206ENST00000433535 KIF4BQ2VIQ3 1234 aa27.88■■■□□ 2.05
RPUSD3-206ENST00000433535 FAM9BQ8IZU0 186 aa27.88■■■□□ 2.05
RPUSD3-206ENST00000433535 BSDC1Q9NW68 430 aaPredicted RBP27.88■■■□□ 2.05
RPUSD3-206ENST00000433535 KRT26Q7Z3Y9 468 aa27.87■■■□□ 2.05
RPUSD3-206ENST00000433535 MINPP1Q9UNW1 487 aa27.87■■■□□ 2.05
RPUSD3-206ENST00000433535 POLR2AP24928 1970 aaKnown RBP27.87■■■□□ 2.05
RPUSD3-206ENST00000433535 AOC2O75106 756 aa27.86■■■□□ 2.05
RPUSD3-206ENST00000433535 HSPA8P11142 646 aaKnown RBP27.86■■■□□ 2.05
RPUSD3-206ENST00000433535 CASP7P55210 303 aa27.86■■■□□ 2.05
RPUSD3-206ENST00000433535 FAM161AQ3B820 660 aa27.86■■■□□ 2.05
RPUSD3-206ENST00000433535 MYH16Q9H6N6 1097 aa27.86■■■□□ 2.05
RPUSD3-206ENST00000433535 ZNF609O15014 1411 aa27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 ADM5C9JUS6 153 aa27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 RSBN1LQ6PCB5 846 aaPredicted RBP27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 LINS1Q8NG48 757 aa27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 PLA2G12BQ9BX93 195 aa27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 ASTN2O75129 1339 aaPredicted RBP27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 MED23Q9ULK4 1368 aa27.85■■■□□ 2.05
RPUSD3-206ENST00000433535 GGA3Q9NZ52 723 aa27.84■■■□□ 2.05
RPUSD3-206ENST00000433535 ZNF646O15015 1829 aaPredicted RBP27.83■■■□□ 2.05
RPUSD3-206ENST00000433535 F6X3S4 739 aa27.83■■■□□ 2.05
RPUSD3-206ENST00000433535 ITGA6P23229 1130 aa27.83■■■□□ 2.05
RPUSD3-206ENST00000433535 DCPSQ96C86 337 aaKnown RBP27.83■■■□□ 2.05
RPUSD3-206ENST00000433535 IGHMBP2P38935 993 aaKnown RBP27.82■■■□□ 2.04
RPUSD3-206ENST00000433535 CCT4P50991 539 aaKnown RBP27.82■■■□□ 2.04
RPUSD3-206ENST00000433535 AGBL3Q8NEM8 1001 aa27.82■■■□□ 2.04
RPUSD3-206ENST00000433535 HHIPL1Q96JK4 782 aa27.82■■■□□ 2.04
RPUSD3-206ENST00000433535 ZNF280AP59817 542 aaPredicted RBP27.81■■■□□ 2.04
RPUSD3-206ENST00000433535 PODNQ7Z5L7 613 aa27.81■■■□□ 2.04
RPUSD3-206ENST00000433535 USP17L3A6NCW0 530 aa27.8■■■□□ 2.04
RPUSD3-206ENST00000433535 USP17L4A6NCW7 530 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms