RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 DLK2Q6UY11 383 aa29.17■■■□□ 2.26
HOMER3-203ENST00000433218 KSR2Q6VAB6 950 aa29.17■■■□□ 2.26
HOMER3-203ENST00000433218 GLIS2Q9BZE0 524 aaPredicted RBP29.17■■■□□ 2.26
HOMER3-203ENST00000433218 SPINK5Q9NQ38 1064 aaPredicted RBP29.17■■■□□ 2.26
HOMER3-203ENST00000433218 CDHR2Q9BYE9 1310 aa29.16■■■□□ 2.26
HOMER3-203ENST00000433218 WTIPA6NIX2 430 aaPredicted RBP29.16■■■□□ 2.26
HOMER3-203ENST00000433218 MICALL2Q8IY33 904 aa29.16■■■□□ 2.26
HOMER3-203ENST00000433218 ABT1Q9ULW3 272 aaKnown RBP29.16■■■□□ 2.26
HOMER3-203ENST00000433218 IL16Q14005 1332 aa29.15■■■□□ 2.26
HOMER3-203ENST00000433218 UFL1O94874 794 aa29.14■■■□□ 2.26
HOMER3-203ENST00000433218 CCDC152Q4G0S7 254 aa29.14■■■□□ 2.26
HOMER3-203ENST00000433218 CNOT7Q9UIV1 285 aaKnown RBP29.14■■■□□ 2.26
HOMER3-203ENST00000433218 NEURL1BA8MQ27 555 aa29.13■■■□□ 2.25
HOMER3-203ENST00000433218 CTSWP56202 376 aa29.13■■■□□ 2.25
HOMER3-203ENST00000433218 TNIP1Q15025 636 aa29.13■■■□□ 2.25
HOMER3-203ENST00000433218 STK31Q9BXU1 1019 aa29.13■■■□□ 2.25
HOMER3-203ENST00000433218 SAMD7Q7Z3H4 446 aa29.12■■■□□ 2.25
HOMER3-203ENST00000433218 SLC4A2P04920 1241 aa29.11■■■□□ 2.25
HOMER3-203ENST00000433218 DEFB115Q30KQ5 88 aa29.11■■■□□ 2.25
HOMER3-203ENST00000433218 TNS4Q8IZW8 715 aa29.11■■■□□ 2.25
HOMER3-203ENST00000433218 GREM2Q9H772 168 aa29.11■■■□□ 2.25
HOMER3-203ENST00000433218 PODXL2Q9NZ53 605 aa29.11■■■□□ 2.25
HOMER3-203ENST00000433218 WDR33Q9C0J8 1336 aaKnown RBP29.11■■■□□ 2.25
HOMER3-203ENST00000433218 CAPN15O75808 1086 aa29.1■■■□□ 2.25
HOMER3-203ENST00000433218 FLIIQ13045 1269 aa29.1■■■□□ 2.25
HOMER3-203ENST00000433218 CYP4F22Q6NT55 531 aa29.1■■■□□ 2.25
HOMER3-203ENST00000433218 UBE3BQ7Z3V4 1068 aa29.1■■■□□ 2.25
HOMER3-203ENST00000433218 ANKIB1Q9P2G1 1089 aa29.1■■■□□ 2.25
HOMER3-203ENST00000433218 EXOSC9Q06265 439 aaKnown RBP29.09■■■□□ 2.25
HOMER3-203ENST00000433218 TBC1D10BQ4KMP7 808 aaPredicted RBP29.09■■■□□ 2.25
HOMER3-203ENST00000433218 TTLL11Q8NHH1 800 aa29.09■■■□□ 2.25
HOMER3-203ENST00000433218 PGAP2Q9UHJ9 254 aa29.09■■■□□ 2.25
HOMER3-203ENST00000433218 GRM1Q13255 1194 aa29.08■■■□□ 2.25
HOMER3-203ENST00000433218 EYA3Q99504 573 aa29.08■■■□□ 2.25
HOMER3-203ENST00000433218 GGA1Q9UJY5 639 aa29.08■■■□□ 2.25
HOMER3-203ENST00000433218 CELF2O95319 508 aaKnown RBP29.07■■■□□ 2.24
HOMER3-203ENST00000433218 ANKRD18AQ8IVF6 992 aa29.07■■■□□ 2.24
HOMER3-203ENST00000433218 ASTN2O75129 1339 aaPredicted RBP29.07■■■□□ 2.24
HOMER3-203ENST00000433218 VAMP4O75379 141 aa29.06■■■□□ 2.24
HOMER3-203ENST00000433218 CASP7P55210 303 aa29.06■■■□□ 2.24
HOMER3-203ENST00000433218 PAXIP1Q6ZW49 1069 aaPredicted RBP29.06■■■□□ 2.24
HOMER3-203ENST00000433218 CAPNS2Q96L46 248 aa29.06■■■□□ 2.24
HOMER3-203ENST00000433218 ZNF408Q9H9D4 720 aa29.06■■■□□ 2.24
HOMER3-203ENST00000433218 WBP1LQ9NX94 342 aa29.06■■■□□ 2.24
HOMER3-203ENST00000433218 TLL2Q9Y6L7 1015 aa29.06■■■□□ 2.24
HOMER3-203ENST00000433218 NEXNQ0ZGT2 675 aa29.05■■■□□ 2.24
HOMER3-203ENST00000433218 XDHP47989 1333 aa29.05■■■□□ 2.24
HOMER3-203ENST00000433218 FKBP5Q13451 457 aaPredicted RBP29.04■■■□□ 2.24
HOMER3-203ENST00000433218 FAM9BQ8IZU0 186 aa29.04■■■□□ 2.24
HOMER3-203ENST00000433218 DPF2Q92785 391 aa29.04■■■□□ 2.24
HOMER3-203ENST00000433218 H7C1W4 665 aa29.03■■■□□ 2.24
HOMER3-203ENST00000433218 GCKRQ14397 625 aa29.03■■■□□ 2.24
HOMER3-203ENST00000433218 FAM161AQ3B820 660 aa29.03■■■□□ 2.24
HOMER3-203ENST00000433218 NCBP3Q53F19 620 aaKnown RBP29.03■■■□□ 2.24
HOMER3-203ENST00000433218 ZC3H12CQ9C0D7 883 aaKnown RBP29.03■■■□□ 2.24
HOMER3-203ENST00000433218 F6X3S4 739 aa29.03■■■□□ 2.24
HOMER3-203ENST00000433218 H7C1D1 291 aa29.03■■■□□ 2.24
HOMER3-203ENST00000433218 AOC2O75106 756 aa29.03■■■□□ 2.24
HOMER3-203ENST00000433218 HSP90B1P14625 803 aaKnown RBP29.03■■■□□ 2.24
HOMER3-203ENST00000433218 RBM26Q5T8P6 1007 aaKnown RBP29.03■■■□□ 2.24
HOMER3-203ENST00000433218 ZNF609O15014 1411 aa29.02■■■□□ 2.24
HOMER3-203ENST00000433218 ADM5C9JUS6 153 aa29.02■■■□□ 2.24
HOMER3-203ENST00000433218 SAPCD2Q86UD0 394 aa29.02■■■□□ 2.24
HOMER3-203ENST00000433218 USP48Q86UV5 1035 aa29.02■■■□□ 2.24
HOMER3-203ENST00000433218 WDR63Q8IWG1 891 aa29.02■■■□□ 2.24
HOMER3-203ENST00000433218 DNAAF4Q8WXU2 420 aa29.02■■■□□ 2.24
HOMER3-203ENST00000433218 MIER1Q8N108 512 aa29.01■■■□□ 2.23
HOMER3-203ENST00000433218 ZC3H15Q8WU90 426 aaKnown RBP29.01■■■□□ 2.23
HOMER3-203ENST00000433218 CHMP4AQ9BY43 222 aa29.01■■■□□ 2.23
HOMER3-203ENST00000433218 MINPP1Q9UNW1 487 aa29.01■■■□□ 2.23
HOMER3-203ENST00000433218 CCER2I3L3R5 266 aa29■■■□□ 2.23
HOMER3-203ENST00000433218 VIL1P09327 827 aaKnown RBP29■■■□□ 2.23
HOMER3-203ENST00000433218 KLRK1P26718 216 aa29■■■□□ 2.23
HOMER3-203ENST00000433218 CDC5LQ99459 802 aaKnown RBP29■■■□□ 2.23
HOMER3-203ENST00000433218 CASP8AP2Q9UKL3 1982 aa28.99■■■□□ 2.23
HOMER3-203ENST00000433218 HSPA8P11142 646 aaKnown RBP28.99■■■□□ 2.23
HOMER3-203ENST00000433218 RPS12P25398 132 aaKnown RBP28.99■■■□□ 2.23
HOMER3-203ENST00000433218 LBX1P52954 281 aa28.99■■■□□ 2.23
HOMER3-203ENST00000433218 KIF4BQ2VIQ3 1234 aa28.99■■■□□ 2.23
HOMER3-203ENST00000433218 MED23Q9ULK4 1368 aa28.99■■■□□ 2.23
HOMER3-203ENST00000433218 TXNRD3Q86VQ6 643 aa28.98■■■□□ 2.23
HOMER3-203ENST00000433218 AIDAQ96BJ3 306 aa28.98■■■□□ 2.23
HOMER3-203ENST00000433218 MXD3Q9BW11 206 aa28.98■■■□□ 2.23
HOMER3-203ENST00000433218 CDC37L1Q7L3B6 337 aa28.97■■■□□ 2.23
HOMER3-203ENST00000433218 BSDC1Q9NW68 430 aaPredicted RBP28.97■■■□□ 2.23
HOMER3-203ENST00000433218 CTCFP49711 727 aaPredicted RBP28.96■■■□□ 2.23
HOMER3-203ENST00000433218 PLA2G12BQ9BX93 195 aa28.96■■■□□ 2.23
HOMER3-203ENST00000433218 GGA3Q9NZ52 723 aa28.96■■■□□ 2.23
HOMER3-203ENST00000433218 ECM29Q5VYK3 1845 aa28.96■■■□□ 2.23
HOMER3-203ENST00000433218 ITGA6P23229 1130 aa28.95■■■□□ 2.23
HOMER3-203ENST00000433218 ATP2B4P23634 1241 aa28.95■■■□□ 2.23
HOMER3-203ENST00000433218 RSBN1LQ6PCB5 846 aaPredicted RBP28.95■■■□□ 2.23
HOMER3-203ENST00000433218 TSKSQ9UJT2 592 aa28.95■■■□□ 2.23
HOMER3-203ENST00000433218 SCAF8Q9UPN6 1271 aaKnown RBP28.95■■■□□ 2.23
HOMER3-203ENST00000433218 G3V3G9 751 aa28.94■■■□□ 2.22
HOMER3-203ENST00000433218 CCT4P50991 539 aaKnown RBP28.94■■■□□ 2.22
HOMER3-203ENST00000433218 DCAF8Q5TAQ9 597 aa28.94■■■□□ 2.22
HOMER3-203ENST00000433218 KRT26Q7Z3Y9 468 aa28.94■■■□□ 2.22
HOMER3-203ENST00000433218 LINS1Q8NG48 757 aa28.94■■■□□ 2.22
HOMER3-203ENST00000433218 ZIC5Q96T25 663 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms