RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 DNA2P51530 1060 aa11.4□□□□□ -0.59
CLTCL1-202ENST00000427926 TNPO1Q92973 898 aaKnown RBP11.4□□□□□ -0.59
CLTCL1-202ENST00000427926 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.59
CLTCL1-202ENST00000427926 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 IL15P40933 162 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 MAP3K11Q16584 847 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 JAG2Q9Y219 1238 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 KDM5BQ9UGL1 1544 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 ARL1P40616 181 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 LUZP1Q86V48 1076 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 OTUD6BQ8N6M0 293 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 RRP36Q96EU6 259 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 SPC25Q9HBM1 224 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 PLCH2O75038 1416 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 RAB11FIP4Q86YS3 637 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 EXOC1Q9NV70 894 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 CWC15Q9P013 229 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 MAST3O60307 1309 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 MCM5P33992 734 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 DYDC1Q8WWB3 177 aa11.39□□□□□ -0.59
CLTCL1-202ENST00000427926 SLC9C2Q5TAH2 1124 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 GCP02774 474 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 CAMK4Q16566 473 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 TBC1D5Q92609 795 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 ABCC2Q92887 1545 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 ORC3Q9UBD5 711 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 YEATS4O95619 227 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 FERP16591 822 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 SLC5A4Q9NY91 659 aa11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-202ENST00000427926 M0QZ92 97 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 LEKR1Q6ZMV7 388 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 TAOK3Q9H2K8 898 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 HELBQ8NG08 1087 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 PLCD4Q9BRC7 762 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 CSADQ9Y600 493 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 GNAT2P19087 354 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 ZNF772Q68DY9 489 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 PARP10Q53GL7 1025 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 NEK1Q96PY6 1258 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
CLTCL1-202ENST00000427926 ZBTB43O43298 467 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 RTN1Q16799 776 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 KCNA6P17658 529 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 PRPF4BQ13523 1007 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 RXRBP28702 533 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 KSR2Q6VAB6 950 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 GINS2Q9Y248 185 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 ANKRD36BQ8N2N9 1353 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 GRM8O00222 908 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 PANK2Q9BZ23 570 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 HMG20BQ9P0W2 317 aa11.36□□□□□ -0.59
CLTCL1-202ENST00000427926 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 PPIP5K2O43314 1243 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 FAM13AO94988 1023 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 OTUD7BQ6GQQ9 843 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 MRVI1Q9Y6F6 885 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 ALDH1L1O75891 902 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 MSANTD4Q8NCY6 345 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 DENND2AQ9ULE3 1009 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
CLTCL1-202ENST00000427926 BMP15O95972 392 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 ZNF526Q8TF50 670 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 ALS2CR12Q96Q35 445 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 NKTRP30414 1462 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 PAFAH1B1P43034 410 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 PKD2L1Q9P0L9 805 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms