RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 TNIP1Q15025 636 aa23.37■■□□□ 1.33
MSH5-207ENST00000425703 FAM161AQ3B820 660 aa23.37■■□□□ 1.33
MSH5-207ENST00000425703 LDHDQ86WU2 507 aa23.37■■□□□ 1.33
MSH5-207ENST00000425703 UTYO14607 1347 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 UFL1O94874 794 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 LMOD1P29536 600 aaPredicted RBP23.36■■□□□ 1.33
MSH5-207ENST00000425703 SCNN1DP51172 638 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 CIAPIN1Q6FI81 312 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 CHADLQ6NUI6 762 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 BCL2L13Q9BXK5 485 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 ZC3H12CQ9C0D7 883 aaKnown RBP23.36■■□□□ 1.33
MSH5-207ENST00000425703 MINPP1Q9UNW1 487 aa23.36■■□□□ 1.33
MSH5-207ENST00000425703 ATP2B4P23634 1241 aa23.35■■□□□ 1.33
MSH5-207ENST00000425703 ANKRD18BA2A2Z9 1011 aa23.34■■□□□ 1.33
MSH5-207ENST00000425703 YDJCA8MPS7 323 aa23.34■■□□□ 1.33
MSH5-207ENST00000425703 CEP350Q5VT06 3117 aa23.33■■□□□ 1.33
MSH5-207ENST00000425703 RIMBP2O15034 1052 aa23.33■■□□□ 1.33
MSH5-207ENST00000425703 POTEIP0CG38 1075 aa23.33■■□□□ 1.33
MSH5-207ENST00000425703 POTEJP0CG39 1038 aa23.33■■□□□ 1.33
MSH5-207ENST00000425703 HNRNPUQ00839 825 aaKnown RBP eCLIP23.33■■□□□ 1.33
MSH5-207ENST00000425703 IFIT5Q13325 482 aaKnown RBP23.33■■□□□ 1.33
MSH5-207ENST00000425703 MPHOSPH8Q99549 860 aa23.33■■□□□ 1.33
MSH5-207ENST00000425703 RAD17O75943 681 aa23.32■■□□□ 1.32
MSH5-207ENST00000425703 LMBR1LQ6UX01 489 aa23.32■■□□□ 1.32
MSH5-207ENST00000425703 ANKRD2Q9GZV1 360 aa23.32■■□□□ 1.32
MSH5-207ENST00000425703 DBNDD1Q9H9R9 158 aa23.32■■□□□ 1.32
MSH5-207ENST00000425703 GPRC5DQ9NZD1 345 aa23.32■■□□□ 1.32
MSH5-207ENST00000425703 ECE2O60344 883 aa23.31■■□□□ 1.32
MSH5-207ENST00000425703 NBPF7P0C2Y1 421 aaPredicted RBP23.31■■□□□ 1.32
MSH5-207ENST00000425703 RARSP54136 660 aaKnown RBP23.31■■□□□ 1.32
MSH5-207ENST00000425703 EAPPQ56P03 285 aaPredicted RBP23.31■■□□□ 1.32
MSH5-207ENST00000425703 EPHA10Q5JZY3 1008 aa23.31■■□□□ 1.32
MSH5-207ENST00000425703 USP50Q70EL3 339 aaPredicted RBP23.31■■□□□ 1.32
MSH5-207ENST00000425703 LEMD3Q9Y2U8 911 aa23.31■■□□□ 1.32
MSH5-207ENST00000425703 EPS15P42566 896 aa23.3■■□□□ 1.32
MSH5-207ENST00000425703 GMPSP49915 693 aaPredicted RBP23.3■■□□□ 1.32
MSH5-207ENST00000425703 CCT4P50991 539 aaKnown RBP23.3■■□□□ 1.32
MSH5-207ENST00000425703 GPR101Q96P66 508 aaPredicted RBP23.3■■□□□ 1.32
MSH5-207ENST00000425703 MED23Q9ULK4 1368 aa23.29■■□□□ 1.32
MSH5-207ENST00000425703 DOK7Q18PE1 504 aa23.29■■□□□ 1.32
MSH5-207ENST00000425703 CCDC57Q2TAC2 916 aa23.29■■□□□ 1.32
MSH5-207ENST00000425703 DPF2Q92785 391 aa23.29■■□□□ 1.32
MSH5-207ENST00000425703 API5Q9BZZ5 524 aaKnown RBP23.29■■□□□ 1.32
MSH5-207ENST00000425703 ADARB2Q9NS39 739 aaKnown RBP23.29■■□□□ 1.32
MSH5-207ENST00000425703 CHMP3Q9Y3E7 222 aa23.29■■□□□ 1.32
MSH5-207ENST00000425703 KIF16BQ96L93 1317 aa23.29■■□□□ 1.32
MSH5-207ENST00000425703 ADAMTSL1Q8N6G6 1762 aa23.28■■□□□ 1.32
MSH5-207ENST00000425703 G3V3G9 751 aa23.28■■□□□ 1.32
MSH5-207ENST00000425703 RPS12P25398 132 aaKnown RBP23.28■■□□□ 1.32
MSH5-207ENST00000425703 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
MSH5-207ENST00000425703 ARHGAP45Q92619 1136 aa23.28■■□□□ 1.32
MSH5-207ENST00000425703 KAZALD1Q96I82 304 aa23.28■■□□□ 1.32
MSH5-207ENST00000425703 SUCLG2Q96I99 432 aa23.28■■□□□ 1.32
MSH5-207ENST00000425703 NOB1Q9ULX3 412 aaKnown RBP23.28■■□□□ 1.32
MSH5-207ENST00000425703 PSMD14O00487 310 aa23.27■■□□□ 1.32
MSH5-207ENST00000425703 RABL6Q3YEC7 729 aaPredicted RBP23.27■■□□□ 1.32
MSH5-207ENST00000425703 PODNQ7Z5L7 613 aa23.27■■□□□ 1.32
MSH5-207ENST00000425703 USP44Q9H0E7 712 aa23.27■■□□□ 1.32
MSH5-207ENST00000425703 CLEC11AQ9Y240 323 aa23.27■■□□□ 1.32
MSH5-207ENST00000425703 CHRNDQ07001 517 aa23.26■■□□□ 1.31
MSH5-207ENST00000425703 ZBED9Q6R2W3 1325 aa23.26■■□□□ 1.31
MSH5-207ENST00000425703 ITGBL1O95965 494 aaPredicted RBP23.25■■□□□ 1.31
MSH5-207ENST00000425703 VIL1P09327 827 aaKnown RBP23.25■■□□□ 1.31
MSH5-207ENST00000425703 DNAJC5GQ8N7S2 189 aa23.25■■□□□ 1.31
MSH5-207ENST00000425703 ZNF804BA4D1E1 1349 aa23.25■■□□□ 1.31
MSH5-207ENST00000425703 PASKQ96RG2 1323 aa23.25■■□□□ 1.31
MSH5-207ENST00000425703 ZNF609O15014 1411 aa23.25■■□□□ 1.31
MSH5-207ENST00000425703 TAF7LQ5H9L4 462 aa23.24■■□□□ 1.31
MSH5-207ENST00000425703 BICC1Q9H694 974 aaKnown RBP23.24■■□□□ 1.31
MSH5-207ENST00000425703 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
MSH5-207ENST00000425703 CNOT7Q9UIV1 285 aaKnown RBP23.24■■□□□ 1.31
MSH5-207ENST00000425703 WTIPA6NIX2 430 aaPredicted RBP23.23■■□□□ 1.31
MSH5-207ENST00000425703 H7C1D1 291 aa23.23■■□□□ 1.31
MSH5-207ENST00000425703 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
MSH5-207ENST00000425703 CNTROBQ8N137 903 aa23.23■■□□□ 1.31
MSH5-207ENST00000425703 COA1Q9GZY4 146 aa23.23■■□□□ 1.31
MSH5-207ENST00000425703 IPO8O15397 1037 aaKnown RBP23.22■■□□□ 1.31
MSH5-207ENST00000425703 C15orf52Q6ZUT6 534 aaKnown RBP23.22■■□□□ 1.31
MSH5-207ENST00000425703 ANKRD44Q8N8A2 993 aa23.22■■□□□ 1.31
MSH5-207ENST00000425703 ZC3H15Q8WU90 426 aaKnown RBP23.22■■□□□ 1.31
MSH5-207ENST00000425703 ZBTB12Q9Y330 459 aaPredicted RBP23.22■■□□□ 1.31
MSH5-207ENST00000425703 KCNJ4P48050 445 aa23.21■■□□□ 1.31
MSH5-207ENST00000425703 MAP1SQ66K74 1059 aaPredicted RBP23.21■■□□□ 1.31
MSH5-207ENST00000425703 MICALL2Q8IY33 904 aa23.21■■□□□ 1.31
MSH5-207ENST00000425703 AGBL3Q8NEM8 1001 aa23.21■■□□□ 1.31
MSH5-207ENST00000425703 ZNF594Q96JF6 807 aaPredicted RBP23.21■■□□□ 1.31
MSH5-207ENST00000425703 CNNM1Q9NRU3 951 aa23.21■■□□□ 1.31
MSH5-207ENST00000425703 CREBZFQ9NS37 354 aa23.21■■□□□ 1.31
MSH5-207ENST00000425703 PGAP2Q9UHJ9 254 aa23.21■■□□□ 1.31
MSH5-207ENST00000425703 SPEF2Q9C093 1822 aa23.2■■□□□ 1.3
MSH5-207ENST00000425703 USP17L3A6NCW0 530 aa23.2■■□□□ 1.3
MSH5-207ENST00000425703 USP17L4A6NCW7 530 aa23.2■■□□□ 1.3
MSH5-207ENST00000425703 RSBN1LQ6PCB5 846 aaPredicted RBP23.2■■□□□ 1.3
MSH5-207ENST00000425703 USP17L1Q7RTZ2 530 aa23.2■■□□□ 1.3
MSH5-207ENST00000425703 HDAC5Q9UQL6 1122 aa23.2■■□□□ 1.3
MSH5-207ENST00000425703 TXNRD3Q86VQ6 643 aa23.19■■□□□ 1.3
MSH5-207ENST00000425703 KLRG1Q96E93 195 aa23.19■■□□□ 1.3
MSH5-207ENST00000425703 IRS2Q9Y4H2 1338 aa23.18■■□□□ 1.3
MSH5-207ENST00000425703 HTRA3P83110 453 aa23.18■■□□□ 1.3
MSH5-207ENST00000425703 INTS3Q68E01 1043 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms