RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 TNIP1Q15025 636 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 SLC51AQ86UW1 340 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 ZC3H12CQ9C0D7 883 aaKnown RBP18.68■□□□□ 0.58
FAM3A-209ENST00000421517 ANKRD2Q9GZV1 360 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 HACL1Q9UJ83 578 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 LEMD3Q9Y2U8 911 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 IFIT5Q13325 482 aaKnown RBP18.67■□□□□ 0.58
FAM3A-209ENST00000421517 RABL6Q3YEC7 729 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-209ENST00000421517 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-209ENST00000421517 HDAC5Q9UQL6 1122 aa18.67■□□□□ 0.58
FAM3A-209ENST00000421517 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
FAM3A-209ENST00000421517 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
FAM3A-209ENST00000421517 CXCL9Q07325 125 aa18.66■□□□□ 0.58
FAM3A-209ENST00000421517 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
FAM3A-209ENST00000421517 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-209ENST00000421517 MPHOSPH8Q99549 860 aa18.66■□□□□ 0.58
FAM3A-209ENST00000421517 ZNF609O15014 1411 aa18.66■□□□□ 0.58
FAM3A-209ENST00000421517 NBPF7P0C2Y1 421 aaPredicted RBP18.65■□□□□ 0.58
FAM3A-209ENST00000421517 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 CIAPIN1Q6FI81 312 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 LDHDQ86WU2 507 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 DPF2Q92785 391 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 USP44Q9H0E7 712 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
FAM3A-209ENST00000421517 MED23Q9ULK4 1368 aa18.65■□□□□ 0.58
FAM3A-209ENST00000421517 UFL1O94874 794 aa18.64■□□□□ 0.57
FAM3A-209ENST00000421517 RPS12P25398 132 aaKnown RBP18.64■□□□□ 0.57
FAM3A-209ENST00000421517 LMOD1P29536 600 aaPredicted RBP18.64■□□□□ 0.57
FAM3A-209ENST00000421517 EPHX2P34913 555 aa18.64■□□□□ 0.57
FAM3A-209ENST00000421517 SCNN1DP51172 638 aa18.64■□□□□ 0.57
FAM3A-209ENST00000421517 APLP1P51693 650 aa18.64■□□□□ 0.57
FAM3A-209ENST00000421517 PODNQ7Z5L7 613 aa18.64■□□□□ 0.57
FAM3A-209ENST00000421517 KAZALD1Q96I82 304 aa18.64■□□□□ 0.57
FAM3A-209ENST00000421517 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
FAM3A-209ENST00000421517 CHADLQ6NUI6 762 aa18.63■□□□□ 0.57
FAM3A-209ENST00000421517 C15orf52Q6ZUT6 534 aaKnown RBP18.63■□□□□ 0.57
FAM3A-209ENST00000421517 USP50Q70EL3 339 aaPredicted RBP18.63■□□□□ 0.57
FAM3A-209ENST00000421517 YDJCA8MPS7 323 aa18.62■□□□□ 0.57
FAM3A-209ENST00000421517 INTS3Q68E01 1043 aaKnown RBP18.62■□□□□ 0.57
FAM3A-209ENST00000421517 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
FAM3A-209ENST00000421517 GPRC5DQ9NZD1 345 aa18.62■□□□□ 0.57
FAM3A-209ENST00000421517 ADAMTSL1Q8N6G6 1762 aa18.61■□□□□ 0.57
FAM3A-209ENST00000421517 ECE2O60344 883 aa18.61■□□□□ 0.57
FAM3A-209ENST00000421517 MMP14P50281 582 aa18.61■□□□□ 0.57
FAM3A-209ENST00000421517 ADARB2Q9NS39 739 aaKnown RBP18.61■□□□□ 0.57
FAM3A-209ENST00000421517 GJA3Q9Y6H8 435 aa18.61■□□□□ 0.57
FAM3A-209ENST00000421517 VIL1P09327 827 aaKnown RBP18.6■□□□□ 0.57
FAM3A-209ENST00000421517 CHRNDQ07001 517 aa18.6■□□□□ 0.57
FAM3A-209ENST00000421517 ZNF804BA4D1E1 1349 aa18.59■□□□□ 0.57
FAM3A-209ENST00000421517 ATF7IPQ6VMQ6 1270 aa18.59■□□□□ 0.57
FAM3A-209ENST00000421517 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
FAM3A-209ENST00000421517 ZC3H15Q8WU90 426 aaKnown RBP18.59■□□□□ 0.57
FAM3A-209ENST00000421517 COA1Q9GZY4 146 aa18.59■□□□□ 0.57
FAM3A-209ENST00000421517 BICC1Q9H694 974 aaKnown RBP18.59■□□□□ 0.57
FAM3A-209ENST00000421517 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
FAM3A-209ENST00000421517 RIMBP2O15034 1052 aa18.58■□□□□ 0.56
FAM3A-209ENST00000421517 ANKRD44Q8N8A2 993 aa18.58■□□□□ 0.56
FAM3A-209ENST00000421517 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.56
FAM3A-209ENST00000421517 DBNDD1Q9H9R9 158 aa18.58■□□□□ 0.56
FAM3A-209ENST00000421517 PGAP2Q9UHJ9 254 aa18.58■□□□□ 0.56
FAM3A-209ENST00000421517 CHMP3Q9Y3E7 222 aa18.58■□□□□ 0.56
FAM3A-209ENST00000421517 G3V3G9 751 aa18.57■□□□□ 0.56
FAM3A-209ENST00000421517 PSMD14O00487 310 aa18.57■□□□□ 0.56
FAM3A-209ENST00000421517 RAD17O75943 681 aa18.57■□□□□ 0.56
FAM3A-209ENST00000421517 TAF7LQ5H9L4 462 aa18.57■□□□□ 0.56
FAM3A-209ENST00000421517 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
FAM3A-209ENST00000421517 MROH5Q6ZUA9 1318 aa18.56■□□□□ 0.56
FAM3A-209ENST00000421517 GNAI3P08754 354 aa18.56■□□□□ 0.56
FAM3A-209ENST00000421517 UBTFL1P0CB47 393 aaPredicted RBP18.56■□□□□ 0.56
FAM3A-209ENST00000421517 TRIM27P14373 513 aa18.56■□□□□ 0.56
FAM3A-209ENST00000421517 EPS15P42566 896 aa18.56■□□□□ 0.56
FAM3A-209ENST00000421517 GMPSP49915 693 aaPredicted RBP18.56■□□□□ 0.56
FAM3A-209ENST00000421517 UBE4AQ14139 1066 aa18.56■□□□□ 0.56
FAM3A-209ENST00000421517 RIPOR2Q9Y4F9 1068 aa18.56■□□□□ 0.56
FAM3A-209ENST00000421517 MYO3BQ8WXR4 1341 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 PASKQ96RG2 1323 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 IRS2Q9Y4H2 1338 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 H7C1D1 291 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 DOK7Q18PE1 504 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 CNNM1Q9NRU3 951 aa18.55■□□□□ 0.56
FAM3A-209ENST00000421517 USP17L3A6NCW0 530 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 USP17L4A6NCW7 530 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 BCAR3O75815 825 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 ITGBL1O95965 494 aaPredicted RBP18.54■□□□□ 0.56
FAM3A-209ENST00000421517 POTEIP0CG38 1075 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 POTEJP0CG39 1038 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 STRIP1Q5VSL9 837 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 USP17L1Q7RTZ2 530 aa18.54■□□□□ 0.56
FAM3A-209ENST00000421517 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
FAM3A-209ENST00000421517 KCNJ4P48050 445 aa18.53■□□□□ 0.56
FAM3A-209ENST00000421517 EAPPQ56P03 285 aaPredicted RBP18.53■□□□□ 0.56
FAM3A-209ENST00000421517 RSBN1LQ6PCB5 846 aaPredicted RBP18.53■□□□□ 0.56
FAM3A-209ENST00000421517 GPR101Q96P66 508 aaPredicted RBP18.53■□□□□ 0.56
FAM3A-209ENST00000421517 PSME4Q14997 1843 aa18.53■□□□□ 0.56
FAM3A-209ENST00000421517 SPEF2Q9C093 1822 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms