RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 HAUS7Q99871 368 aa21.22■□□□□ 0.99
SCARB1-203ENST00000415380 CFAP45Q9UL16 551 aa21.22■□□□□ 0.99
SCARB1-203ENST00000415380 DDX46Q7L014 1031 aaKnown RBP21.21■□□□□ 0.99
SCARB1-203ENST00000415380 UBE3BQ7Z3V4 1068 aa21.21■□□□□ 0.99
SCARB1-203ENST00000415380 SMARCC2Q8TAQ2 1214 aa21.21■□□□□ 0.99
SCARB1-203ENST00000415380 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-203ENST00000415380 RABL6Q3YEC7 729 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-203ENST00000415380 STOX1Q6ZVD7 989 aa21.21■□□□□ 0.99
SCARB1-203ENST00000415380 ERBB3P21860 1342 aa21.21■□□□□ 0.99
SCARB1-203ENST00000415380 PRDM4Q9UKN5 801 aa21.2■□□□□ 0.99
SCARB1-203ENST00000415380 USP16Q9Y5T5 823 aa21.2■□□□□ 0.99
SCARB1-203ENST00000415380 CTIFO43310 598 aaKnown RBP21.2■□□□□ 0.98
SCARB1-203ENST00000415380 CEBPZQ03701 1054 aaKnown RBP21.2■□□□□ 0.98
SCARB1-203ENST00000415380 PPP4R3BQ5MIZ7 849 aa21.2■□□□□ 0.98
SCARB1-203ENST00000415380 ADD1P35611 737 aaKnown RBP21.2■□□□□ 0.98
SCARB1-203ENST00000415380 CLIP2Q9UDT6 1046 aa21.2■□□□□ 0.98
SCARB1-203ENST00000415380 PFKFB2O60825 505 aa21.19■□□□□ 0.98
SCARB1-203ENST00000415380 FGD1P98174 961 aa21.19■□□□□ 0.98
SCARB1-203ENST00000415380 RAPGEF4Q8WZA2 1011 aa21.19■□□□□ 0.98
SCARB1-203ENST00000415380 LLPHQ9BRT6 129 aaKnown RBP21.19■□□□□ 0.98
SCARB1-203ENST00000415380 PRDM10Q9NQV6 1147 aa21.19■□□□□ 0.98
SCARB1-203ENST00000415380 RGPD5Q99666 1765 aa21.19■□□□□ 0.98
SCARB1-203ENST00000415380 SCN11AQ9UI33 1791 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 CAVIN2O95810 425 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 PHKG2P15735 406 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 NSUN7Q8NE18 718 aaKnown RBP21.18■□□□□ 0.98
SCARB1-203ENST00000415380 ANKRD7Q92527 254 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 FOSBP53539 338 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 IQCB1Q15051 598 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 PDCL2Q8N4E4 241 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
SCARB1-203ENST00000415380 C16orf45Q96MC5 204 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-203ENST00000415380 ATP5J2-PTCD1G3V325 749 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 PTCD1O75127 700 aaKnown RBP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 CTDNEP1O95476 244 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 CCDC144BQ3MJ40 725 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 CCDC144CPQ8IYA2 1237 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 CACTINQ8WUQ7 758 aaKnown RBP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 FTOQ9C0B1 505 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 SH3TC1Q8TE82 1336 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 A0A087WZG4 1122 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 CDC25BP30305 580 aa21.17■□□□□ 0.98
SCARB1-203ENST00000415380 NAA16Q6N069 864 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 C11orf57Q6ZUT1 292 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 DHX32Q7L7V1 743 aaKnown RBP21.17■□□□□ 0.98
SCARB1-203ENST00000415380 HMGB1P09429 215 aaKnown RBP21.16■□□□□ 0.98
SCARB1-203ENST00000415380 SNRPA1P09661 255 aaKnown RBP21.16■□□□□ 0.98
SCARB1-203ENST00000415380 ZC3H6P61129 1189 aaKnown RBP21.16■□□□□ 0.98
SCARB1-203ENST00000415380 ATP2B3Q16720 1220 aa21.16■□□□□ 0.98
SCARB1-203ENST00000415380 CCAR1Q8IX12 1150 aaKnown RBP21.16■□□□□ 0.98
SCARB1-203ENST00000415380 RCOR1Q9UKL0 485 aa21.16■□□□□ 0.98
SCARB1-203ENST00000415380 AFDNP55196 1824 aaKnown RBP21.16■□□□□ 0.98
SCARB1-203ENST00000415380 APOBRQ0VD83 1088 aa21.16■□□□□ 0.98
SCARB1-203ENST00000415380 SLFNL1Q499Z3 407 aa21.16■□□□□ 0.98
SCARB1-203ENST00000415380 KRT28Q7Z3Y7 464 aa21.16■□□□□ 0.98
SCARB1-203ENST00000415380 GOLPH3LQ9H4A5 285 aa21.16■□□□□ 0.98
SCARB1-203ENST00000415380 TRPM3Q9HCF6 1732 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-203ENST00000415380 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
SCARB1-203ENST00000415380 CBX1P83916 185 aa21.15■□□□□ 0.98
SCARB1-203ENST00000415380 NLRP2Q9NX02 1062 aa21.15■□□□□ 0.98
SCARB1-203ENST00000415380 GOLGA6L19H0YKK7 550 aa21.15■□□□□ 0.98
SCARB1-203ENST00000415380 CASP7P55210 303 aa21.15■□□□□ 0.98
SCARB1-203ENST00000415380 SARM1Q6SZW1 724 aa21.14■□□□□ 0.98
SCARB1-203ENST00000415380 TTC5Q8N0Z6 440 aa21.14■□□□□ 0.98
SCARB1-203ENST00000415380 LAMA4Q16363 1823 aa21.14■□□□□ 0.97
SCARB1-203ENST00000415380 CTAGE5O15320 804 aa21.14■□□□□ 0.97
SCARB1-203ENST00000415380 TNNT1P13805 278 aa21.14■□□□□ 0.97
SCARB1-203ENST00000415380 TATP17735 454 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-203ENST00000415380 STX1AQ16623 288 aa21.14■□□□□ 0.97
SCARB1-203ENST00000415380 LMBR1LQ6UX01 489 aa21.14■□□□□ 0.97
SCARB1-203ENST00000415380 PALLDQ8WX93 1383 aa21.14■□□□□ 0.97
SCARB1-203ENST00000415380 GOLIM4O00461 696 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 CCT2P78371 535 aaKnown RBP21.13■□□□□ 0.97
SCARB1-203ENST00000415380 EXOSC10Q01780 885 aaKnown RBP21.13■□□□□ 0.97
SCARB1-203ENST00000415380 USP28Q96RU2 1077 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 MYH15Q9Y2K3 1946 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 SMTNL1A8MU46 457 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 SNW1Q13573 536 aaKnown RBP21.13■□□□□ 0.97
SCARB1-203ENST00000415380 HELLSQ9NRZ9 838 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 ARFGEF2Q9Y6D5 1785 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-203ENST00000415380 DSCC1Q9BVC3 393 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 AGXT2Q9BYV1 514 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 PAG1Q9NWQ8 432 aa21.13■□□□□ 0.97
SCARB1-203ENST00000415380 A0A0G2JLW4 131 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 NEUROD6Q96NK8 337 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 NCOA5Q9HCD5 579 aaKnown RBP21.12■□□□□ 0.97
SCARB1-203ENST00000415380 MEGF6O75095 1541 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 CCDC73Q6ZRK6 1079 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 MRFAP1L1Q96HT8 127 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 FMNL2Q96PY5 1086 aa21.12■□□□□ 0.97
SCARB1-203ENST00000415380 NCBP1Q09161 790 aaKnown RBP21.11■□□□□ 0.97
SCARB1-203ENST00000415380 TPD52L1Q16890 204 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-203ENST00000415380 LRRC8AQ8IWT6 810 aa21.11■□□□□ 0.97
SCARB1-203ENST00000415380 SALL1Q9NSC2 1324 aa21.11■□□□□ 0.97
SCARB1-203ENST00000415380 E7EWF7 191 aa21.11■□□□□ 0.97
SCARB1-203ENST00000415380 ZSCAN20P17040 1043 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-203ENST00000415380 ENGASEQ8NFI3 743 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms