RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC144CPQ8IYA2 1237 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 TSPY2A6NKD2 308 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 ANXA1P04083 346 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 TDRD12Q587J7 1177 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 PAXIP1Q6ZW49 1069 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 ADGRL2O95490 1459 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 UBA7P41226 1012 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 CADPS2Q86UW7 1296 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 LINS1Q8NG48 757 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 BCCIPQ9P287 314 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.111e-8■■■□□ 18.5
SMARCA4-202ENST00000413806 A0A1W2PP64 1363 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 GIGYF2Q6Y7W6 1299 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 Q6ZUG5 572 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 PANK2Q9BZ23 570 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 TRIM21P19474 475 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 NMIQ13287 307 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 ALG1Q9BT22 464 aa15.71■□□□□ 0.11
SMARCA4-202ENST00000413806 PER1O15534 1290 aaPredicted RBP15.71■□□□□ 0.1
SMARCA4-202ENST00000413806 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.1
SMARCA4-202ENST00000413806 CARD14Q9BXL6 1004 aa15.71■□□□□ 0.1
SMARCA4-202ENST00000413806 TRPM2O94759 1503 aa15.71■□□□□ 0.1
SMARCA4-202ENST00000413806 HSPA4P34932 840 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 ATP2B3Q16720 1220 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 PPP4R3AQ6IN85 833 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 COPS6Q7L5N1 327 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 UBA5Q9GZZ9 404 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 SSR1P43307 286 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 C16orf71Q8IYS4 520 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 IGSF3O75054 1194 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 OGFRQ9NZT2 677 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 SPAG1Q07617 926 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 CCDC40Q4G0X9 1142 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 C10orf67Q8IYJ2 551 aa15.7■□□□□ 0.1
SMARCA4-202ENST00000413806 NBPF7P0C2Y1 421 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 ESR2Q92731 530 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 CETN1Q12798 172 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 UBASH3AP57075 661 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 SPATA24Q86W54 205 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 CEP63Q96MT8 703 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 TNNQ9UQP3 1299 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 CLGNO14967 610 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 PIP4K2BP78356 416 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 RTN1Q16799 776 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 ZCRB1Q8TBF4 217 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 ZKSCAN5Q9Y2L8 839 aa15.69■□□□□ 0.1
SMARCA4-202ENST00000413806 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 PAG1Q9NWQ8 432 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 SPECC1LQ69YQ0 1117 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 USP26Q9BXU7 913 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 BABAM1Q9NWV8 329 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 DNM1Q05193 864 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 PAF1Q8N7H5 531 aa15.68■□□□□ 0.1
SMARCA4-202ENST00000413806 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 GCOM1H8Y6P7 765 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 EXOC1Q9NV70 894 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 CHMLP26374 656 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 AK2P54819 239 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 GNG11P61952 73 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 N4BP3O15049 544 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 RNF113AO15541 343 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 GNAQP50148 359 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 CREB3L3Q68CJ9 461 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 RAB11FIP4Q86YS3 637 aa15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-202ENST00000413806 HLA-DOAP06340 250 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 GNAT2P19087 354 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 CKAP4Q07065 602 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 SKILP12757 684 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 RUFY3Q7L099 469 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 JARID2Q92833 1246 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 SLC4A4Q9Y6R1 1079 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 IFI16Q16666 785 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 IFIT1BQ5T764 474 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 FEZ1Q99689 392 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 AOX1Q06278 1338 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 RTL1A6NKG5 1358 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 MSH6P52701 1360 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 ATL3Q6DD88 541 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 GBP6Q6ZN66 633 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 ZBTB7BO15156 539 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 PRC1O43663 620 aa15.66■□□□□ 0.1
SMARCA4-202ENST00000413806 ATP2C2O75185 946 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms