RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 GPSM2P81274 684 aa19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 TAF7LQ5H9L4 462 aa19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 C9orf131Q5VYM1 1079 aa19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 ZNF594Q96JF6 807 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 VPS33BQ9H267 617 aa19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
TRAPPC12-203ENST00000411973 XDHP47989 1333 aa19.29■□□□□ 0.68
TRAPPC12-203ENST00000411973 RFX5P48382 616 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC12-203ENST00000411973 LDHAL6AQ6ZMR3 332 aa19.29■□□□□ 0.68
TRAPPC12-203ENST00000411973 ZNF277Q9NRM2 450 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC12-203ENST00000411973 RNF181Q9P0P0 153 aa19.29■□□□□ 0.68
TRAPPC12-203ENST00000411973 IARSP41252 1262 aaKnown RBP19.28■□□□□ 0.68
TRAPPC12-203ENST00000411973 ANKRD2Q9GZV1 360 aa19.28■□□□□ 0.68
TRAPPC12-203ENST00000411973 ANKIB1Q9P2G1 1089 aa19.28■□□□□ 0.68
TRAPPC12-203ENST00000411973 ZC3H4Q9UPT8 1303 aaKnown RBP19.27■□□□□ 0.68
TRAPPC12-203ENST00000411973 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
TRAPPC12-203ENST00000411973 PTPN12Q05209 780 aaKnown RBP19.27■□□□□ 0.68
TRAPPC12-203ENST00000411973 TBC1D16Q8TBP0 767 aa19.27■□□□□ 0.68
TRAPPC12-203ENST00000411973 ZBTB40Q9NUA8 1239 aa19.27■□□□□ 0.68
TRAPPC12-203ENST00000411973 POLLQ9UGP5 575 aa19.27■□□□□ 0.68
TRAPPC12-203ENST00000411973 SRGAP3O43295 1099 aa19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 CHRNDQ07001 517 aa19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 PUS3Q9BZE2 481 aaKnown RBP19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 CNNM1Q9NRU3 951 aa19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 GGA1Q9UJY5 639 aa19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 FBXO3Q9UK99 471 aa19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
TRAPPC12-203ENST00000411973 TIAM2Q8IVF5 1701 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 ATP2B4P23634 1241 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 KIAA2012Q0VF49 1180 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 C1orf115Q9H7X2 142 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 COPRSQ9NQ92 184 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 LEMD3Q9Y2U8 911 aa19.25■□□□□ 0.67
TRAPPC12-203ENST00000411973 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 UFL1O94874 794 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 WASHC4Q2M389 1173 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 EYA3Q99504 573 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 MROH5Q6ZUA9 1318 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 COL4A5P29400 1685 aa19.24■□□□□ 0.67
TRAPPC12-203ENST00000411973 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 EYA2O00167 538 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 CIAO1O76071 339 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 YY1P25490 414 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 LRRC24Q50LG9 513 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 SSH3Q8TE77 659 aa19.23■□□□□ 0.67
TRAPPC12-203ENST00000411973 POLA2Q14181 598 aa19.22■□□□□ 0.67
TRAPPC12-203ENST00000411973 AOC3Q16853 763 aa19.22■□□□□ 0.67
TRAPPC12-203ENST00000411973 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
TRAPPC12-203ENST00000411973 JDP2Q8WYK2 163 aa19.22■□□□□ 0.67
TRAPPC12-203ENST00000411973 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
TRAPPC12-203ENST00000411973 ZNF804BA4D1E1 1349 aa19.22■□□□□ 0.67
TRAPPC12-203ENST00000411973 WTIPA6NIX2 430 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC12-203ENST00000411973 ATG9AQ7Z3C6 839 aa19.21■□□□□ 0.67
TRAPPC12-203ENST00000411973 HELBQ8NG08 1087 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC12-203ENST00000411973 ZC3H12CQ9C0D7 883 aaKnown RBP19.21■□□□□ 0.67
TRAPPC12-203ENST00000411973 MED23Q9ULK4 1368 aa19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 FZD9O00144 591 aa19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 TAF5LO75529 589 aa19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 VGLL2Q8N8G2 317 aa19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 GPR101Q96P66 508 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 PA2G4Q9UQ80 394 aaKnown RBP19.2■□□□□ 0.66
TRAPPC12-203ENST00000411973 IL15P40933 162 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC12-203ENST00000411973 UBE4AQ14139 1066 aa19.19■□□□□ 0.66
TRAPPC12-203ENST00000411973 METTL24Q5JXM2 366 aa19.19■□□□□ 0.66
TRAPPC12-203ENST00000411973 C15orf52Q6ZUT6 534 aaKnown RBP19.19■□□□□ 0.66
TRAPPC12-203ENST00000411973 SIL1Q9H173 461 aa19.19■□□□□ 0.66
TRAPPC12-203ENST00000411973 RIMBP2O15034 1052 aa19.18■□□□□ 0.66
TRAPPC12-203ENST00000411973 PDE8BO95263 885 aa19.18■□□□□ 0.66
TRAPPC12-203ENST00000411973 KCNJ4P48050 445 aa19.18■□□□□ 0.66
TRAPPC12-203ENST00000411973 NIM1KQ8IY84 436 aa19.18■□□□□ 0.66
TRAPPC12-203ENST00000411973 ZNRF3Q9ULT6 936 aa19.18■□□□□ 0.66
TRAPPC12-203ENST00000411973 IRS2Q9Y4H2 1338 aa19.18■□□□□ 0.66
TRAPPC12-203ENST00000411973 CRBNQ96SW2 442 aa19.17■□□□□ 0.66
TRAPPC12-203ENST00000411973 GLTPD2A6NH11 291 aa19.16■□□□□ 0.66
TRAPPC12-203ENST00000411973 SNAP23O00161 211 aa19.16■□□□□ 0.66
TRAPPC12-203ENST00000411973 DPY19L2Q6NUT2 758 aa19.16■□□□□ 0.66
TRAPPC12-203ENST00000411973 TXNRD3Q86VQ6 643 aa19.16■□□□□ 0.66
TRAPPC12-203ENST00000411973 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
TRAPPC12-203ENST00000411973 NOP58Q9Y2X3 529 aaKnown RBP19.16■□□□□ 0.66
TRAPPC12-203ENST00000411973 FGFR2P21802 821 aa19.15■□□□□ 0.66
TRAPPC12-203ENST00000411973 KLRK1P26718 216 aa19.15■□□□□ 0.66
TRAPPC12-203ENST00000411973 EIF6P56537 245 aaKnown RBP19.15■□□□□ 0.66
TRAPPC12-203ENST00000411973 AAMPQ13685 434 aa19.15■□□□□ 0.66
TRAPPC12-203ENST00000411973 DBNDD1Q9H9R9 158 aa19.15■□□□□ 0.66
TRAPPC12-203ENST00000411973 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
TRAPPC12-203ENST00000411973 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 ECE2O60344 883 aa19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 HMMRO75330 724 aa19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 PUM3Q15397 648 aaKnown RBP19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 DOK7Q18PE1 504 aa19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 PODNQ7Z5L7 613 aa19.14■□□□□ 0.65
TRAPPC12-203ENST00000411973 COA1Q9GZY4 146 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms