RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 KAZALD1Q96I82 304 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 EYA3Q99504 573 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 MPHOSPH8Q99549 860 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 BICC1Q9H694 974 aaKnown RBP10.3□□□□□ -0.76
RPE-204ENST00000411934 SEC31BQ9NQW1 1179 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 RNF181Q9P0P0 153 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 SPEF2Q9C093 1822 aa10.29□□□□□ -0.76
RPE-204ENST00000411934 KIAA2012Q0VF49 1180 aa10.29□□□□□ -0.76
RPE-204ENST00000411934 EPHA10Q5JZY3 1008 aa10.29□□□□□ -0.76
RPE-204ENST00000411934 ANKRD44Q8N8A2 993 aa10.29□□□□□ -0.76
RPE-204ENST00000411934 JARID2Q92833 1246 aaPredicted RBP10.29□□□□□ -0.76
RPE-204ENST00000411934 ANKRD2Q9GZV1 360 aa10.29□□□□□ -0.76
RPE-204ENST00000411934 MED23Q9ULK4 1368 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 TMEM57Q8N5G2 664 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 JDP2Q8WYK2 163 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 YTHDC1Q96MU7 727 aaKnown RBP10.28□□□□□ -0.76
RPE-204ENST00000411934 MEIS3Q99687 375 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 GGA1Q9UJY5 639 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 LEMD3Q9Y2U8 911 aa10.28□□□□□ -0.76
RPE-204ENST00000411934 WDR90Q96KV7 1748 aa10.27□□□□□ -0.76
RPE-204ENST00000411934 ZNF609O15014 1411 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 FZD9O00144 591 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 GNAI2P04899 355 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 MVPQ14764 893 aaKnown RBP10.27□□□□□ -0.77
RPE-204ENST00000411934 TAF7LQ5H9L4 462 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 OLFM4Q6UX06 510 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 ITPRIPQ8IWB1 547 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
RPE-204ENST00000411934 ANKIB1Q9P2G1 1089 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 MINPP1Q9UNW1 487 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 NSFL1CQ9UNZ2 370 aaKnown RBP10.27□□□□□ -0.77
RPE-204ENST00000411934 CHMP3Q9Y3E7 222 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
RPE-204ENST00000411934 MROH5Q6ZUA9 1318 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 KDM2BQ8NHM5 1336 aa10.27□□□□□ -0.77
RPE-204ENST00000411934 ZBTB7BO15156 539 aaPredicted RBP10.26□□□□□ -0.77
RPE-204ENST00000411934 PPIP5K2O43314 1243 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 RLBP1P12271 317 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 PRELPP51888 382 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 GPSM2P81274 684 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 DPY19L2Q6NUT2 758 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 LDHAL6AQ6ZMR3 332 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 C15orf52Q6ZUT6 534 aaKnown RBP10.26□□□□□ -0.77
RPE-204ENST00000411934 NIM1KQ8IY84 436 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 LARGE2Q8N3Y3 721 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 TBC1D16Q8TBP0 767 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 ZNF277Q9NRM2 450 aaPredicted RBP10.26□□□□□ -0.77
RPE-204ENST00000411934 PSME4Q14997 1843 aa10.26□□□□□ -0.77
RPE-204ENST00000411934 GLTPD2A6NH11 291 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 CIAO1O76071 339 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 UFL1O94874 794 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 RFX5P48382 616 aaPredicted RBP10.25□□□□□ -0.77
RPE-204ENST00000411934 CHRNDQ07001 517 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 SAMD1Q6SPF0 538 aaPredicted RBP10.25□□□□□ -0.77
RPE-204ENST00000411934 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
RPE-204ENST00000411934 COPRSQ9NQ92 184 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 CNNM1Q9NRU3 951 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 POLLQ9UGP5 575 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 TNNQ9UQP3 1299 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 SCN4AP35499 1836 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 COL4A5P29400 1685 aa10.25□□□□□ -0.77
RPE-204ENST00000411934 C6orf229H3BNL8 230 aa10.24□□□□□ -0.77
RPE-204ENST00000411934 RRP1P56182 461 aaKnown RBP10.24□□□□□ -0.77
RPE-204ENST00000411934 EIF6P56537 245 aaKnown RBP10.24□□□□□ -0.77
RPE-204ENST00000411934 PTPN12Q05209 780 aaKnown RBP10.24□□□□□ -0.77
RPE-204ENST00000411934 UBE4AQ14139 1066 aa10.24□□□□□ -0.77
RPE-204ENST00000411934 AOC3Q16853 763 aa10.24□□□□□ -0.77
RPE-204ENST00000411934 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
RPE-204ENST00000411934 ZC3H12CQ9C0D7 883 aaKnown RBP10.24□□□□□ -0.77
RPE-204ENST00000411934 ZNRF3Q9ULT6 936 aa10.24□□□□□ -0.77
RPE-204ENST00000411934 RIPOR2Q9Y4F9 1068 aa10.24□□□□□ -0.77
RPE-204ENST00000411934 EYA2O00167 538 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 ZBTB22O15209 634 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 EVX2Q03828 476 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 AAMPQ13685 434 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 PODNQ7Z5L7 613 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 GPC2Q8N158 579 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 PANK1Q8TE04 598 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 GPBP1L1Q9HC44 474 aaPredicted RBP10.23□□□□□ -0.77
RPE-204ENST00000411934 ZNF804BA4D1E1 1349 aa10.23□□□□□ -0.77
RPE-204ENST00000411934 ARAP2Q8WZ64 1704 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 IQCA1LA6NCM1 817 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 SRGAP3O43295 1099 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 IL15P40933 162 aaPredicted RBP10.22□□□□□ -0.77
RPE-204ENST00000411934 KCNJ4P48050 445 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 MMP14P50281 582 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 POLA2Q14181 598 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 TNIP1Q15025 636 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 RPAP2Q8IXW5 612 aaPredicted RBP10.22□□□□□ -0.77
RPE-204ENST00000411934 REM2Q8IYK8 340 aaPredicted RBP10.22□□□□□ -0.77
RPE-204ENST00000411934 VGLL2Q8N8G2 317 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 SSH3Q8TE77 659 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 ZBTB40Q9NUA8 1239 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms