RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 C2orf69Q8N8R5 385 aa21.66■■□□□ 1.06
MRPL55-220ENST00000411464 TRPM7Q96QT4 1865 aa21.66■■□□□ 1.06
MRPL55-220ENST00000411464 DUOX1Q9NRD9 1551 aa21.65■■□□□ 1.06
MRPL55-220ENST00000411464 EGFRP00533 1210 aa21.65■■□□□ 1.06
MRPL55-220ENST00000411464 ANKIB1Q9P2G1 1089 aa21.65■■□□□ 1.06
MRPL55-220ENST00000411464 RGMBQ6NW40 437 aa21.64■■□□□ 1.05
MRPL55-220ENST00000411464 GBA2Q9HCG7 927 aaPredicted RBP21.64■■□□□ 1.05
MRPL55-220ENST00000411464 PODXL2Q9NZ53 605 aa21.64■■□□□ 1.05
MRPL55-220ENST00000411464 LAMB2P55268 1798 aa21.64■■□□□ 1.05
MRPL55-220ENST00000411464 RTL9Q8NET4 1388 aa21.63■■□□□ 1.05
MRPL55-220ENST00000411464 UFL1O94874 794 aa21.63■■□□□ 1.05
MRPL55-220ENST00000411464 VIL1P09327 827 aaKnown RBP21.63■■□□□ 1.05
MRPL55-220ENST00000411464 MLLT1Q03111 559 aaPredicted RBP21.63■■□□□ 1.05
MRPL55-220ENST00000411464 CCDC102AQ96A19 550 aa21.63■■□□□ 1.05
MRPL55-220ENST00000411464 ZIC5Q96T25 663 aa21.63■■□□□ 1.05
MRPL55-220ENST00000411464 MCOLN1Q9GZU1 580 aa21.63■■□□□ 1.05
MRPL55-220ENST00000411464 PHAXQ9H814 394 aaKnown RBP21.63■■□□□ 1.05
MRPL55-220ENST00000411464 SEC31BQ9NQW1 1179 aa21.63■■□□□ 1.05
MRPL55-220ENST00000411464 ELL2O00472 640 aaPredicted RBP21.62■■□□□ 1.05
MRPL55-220ENST00000411464 CALD1Q05682 793 aaKnown RBP21.62■■□□□ 1.05
MRPL55-220ENST00000411464 KIF4BQ2VIQ3 1234 aa21.62■■□□□ 1.05
MRPL55-220ENST00000411464 CCDC152Q4G0S7 254 aa21.62■■□□□ 1.05
MRPL55-220ENST00000411464 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
MRPL55-220ENST00000411464 MYD88Q99836 296 aa21.62■■□□□ 1.05
MRPL55-220ENST00000411464 GGA1Q9UJY5 639 aa21.62■■□□□ 1.05
MRPL55-220ENST00000411464 ADM5C9JUS6 153 aa21.61■■□□□ 1.05
MRPL55-220ENST00000411464 ZNF853P0CG23 659 aa21.61■■□□□ 1.05
MRPL55-220ENST00000411464 GNAI1P63096 354 aa21.61■■□□□ 1.05
MRPL55-220ENST00000411464 CCDC191Q8NCU4 936 aa21.61■■□□□ 1.05
MRPL55-220ENST00000411464 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
MRPL55-220ENST00000411464 PCCAP05165 728 aaPredicted RBP21.6■■□□□ 1.05
MRPL55-220ENST00000411464 RGS19P49795 217 aa21.6■■□□□ 1.05
MRPL55-220ENST00000411464 ZNF157P51786 506 aaPredicted RBP21.6■■□□□ 1.05
MRPL55-220ENST00000411464 DGKZQ13574 1117 aa21.6■■□□□ 1.05
MRPL55-220ENST00000411464 CHMP4AQ9BY43 222 aa21.6■■□□□ 1.05
MRPL55-220ENST00000411464 LRRC37AA6NMS7 1700 aa21.59■■□□□ 1.05
MRPL55-220ENST00000411464 FAM155AB1AL88 458 aaPredicted RBP21.59■■□□□ 1.05
MRPL55-220ENST00000411464 PDE8AO60658 829 aa21.59■■□□□ 1.05
MRPL55-220ENST00000411464 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
MRPL55-220ENST00000411464 GGA3Q9NZ52 723 aa21.59■■□□□ 1.05
MRPL55-220ENST00000411464 TAF1P21675 1872 aa21.58■■□□□ 1.05
MRPL55-220ENST00000411464 APAF1O14727 1248 aa21.58■■□□□ 1.05
MRPL55-220ENST00000411464 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
MRPL55-220ENST00000411464 KIF23Q02241 960 aaPredicted RBP21.58■■□□□ 1.05
MRPL55-220ENST00000411464 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
MRPL55-220ENST00000411464 CCDC85AQ96PX6 553 aaPredicted RBP21.58■■□□□ 1.05
MRPL55-220ENST00000411464 RSBN1LQ6PCB5 846 aaPredicted RBP21.57■■□□□ 1.04
MRPL55-220ENST00000411464 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
MRPL55-220ENST00000411464 JARID2Q92833 1246 aaPredicted RBP21.57■■□□□ 1.04
MRPL55-220ENST00000411464 DDX60Q8IY21 1712 aaKnown RBP21.57■■□□□ 1.04
MRPL55-220ENST00000411464 ZNF280AP59817 542 aaPredicted RBP21.56■■□□□ 1.04
MRPL55-220ENST00000411464 SCARF1Q14162 830 aa21.56■■□□□ 1.04
MRPL55-220ENST00000411464 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
MRPL55-220ENST00000411464 METTL22Q9BUU2 404 aaPredicted RBP21.56■■□□□ 1.04
MRPL55-220ENST00000411464 SAGE1Q9NXZ1 904 aa21.56■■□□□ 1.04
MRPL55-220ENST00000411464 XDHP47989 1333 aa21.55■■□□□ 1.04
MRPL55-220ENST00000411464 C8orf58Q8NAV2 365 aa21.55■■□□□ 1.04
MRPL55-220ENST00000411464 CDCA5Q96FF9 252 aa21.55■■□□□ 1.04
MRPL55-220ENST00000411464 ASTN2O75129 1339 aaPredicted RBP21.55■■□□□ 1.04
MRPL55-220ENST00000411464 USP17L8P0C7I0 530 aa21.54■■□□□ 1.04
MRPL55-220ENST00000411464 ATP2B4P23634 1241 aa21.54■■□□□ 1.04
MRPL55-220ENST00000411464 ANGEL2Q5VTE6 544 aaKnown RBP21.54■■□□□ 1.04
MRPL55-220ENST00000411464 PODNQ7Z5L7 613 aa21.54■■□□□ 1.04
MRPL55-220ENST00000411464 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
MRPL55-220ENST00000411464 COL4A1P02462 1669 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 USP17L3A6NCW0 530 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 USP17L4A6NCW7 530 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 TRPA1O75762 1119 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 USP17L1Q7RTZ2 530 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 CDC5LQ99459 802 aaKnown RBP21.53■■□□□ 1.04
MRPL55-220ENST00000411464 RNF186Q9NXI6 227 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 MAP3K2Q9Y2U5 619 aa21.53■■□□□ 1.04
MRPL55-220ENST00000411464 SLC10A3P09131 477 aa21.52■■□□□ 1.04
MRPL55-220ENST00000411464 MYOZ2Q9NPC6 264 aa21.52■■□□□ 1.04
MRPL55-220ENST00000411464 REM2Q8IYK8 340 aaPredicted RBP21.51■■□□□ 1.03
MRPL55-220ENST00000411464 CSRNP1Q96S65 589 aa21.51■■□□□ 1.03
MRPL55-220ENST00000411464 GMLQ99445 158 aa21.51■■□□□ 1.03
MRPL55-220ENST00000411464 CTSWP56202 376 aa21.5■■□□□ 1.03
MRPL55-220ENST00000411464 FKBP1BP68106 108 aa21.5■■□□□ 1.03
MRPL55-220ENST00000411464 NEXNQ0ZGT2 675 aa21.5■■□□□ 1.03
MRPL55-220ENST00000411464 KSR2Q6VAB6 950 aa21.5■■□□□ 1.03
MRPL55-220ENST00000411464 PI4KAP2A4QPH2 592 aa21.49■■□□□ 1.03
MRPL55-220ENST00000411464 PI4KAP1Q8N8J0 262 aa21.49■■□□□ 1.03
MRPL55-220ENST00000411464 BSDC1Q9NW68 430 aaPredicted RBP21.49■■□□□ 1.03
MRPL55-220ENST00000411464 ZNF609O15014 1411 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 OGFOD1Q8N543 542 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 TSPYL6Q8N831 410 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 TTLL11Q8NHH1 800 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 STK31Q9BXU1 1019 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 MINPP1Q9UNW1 487 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 PITPNM2Q9BZ72 1349 aa21.48■■□□□ 1.03
MRPL55-220ENST00000411464 IGKV5-2P06315 115 aa21.47■■□□□ 1.03
MRPL55-220ENST00000411464 WTIPA6NIX2 430 aaPredicted RBP21.46■■□□□ 1.03
MRPL55-220ENST00000411464 RASAL3Q86YV0 1011 aa21.46■■□□□ 1.03
MRPL55-220ENST00000411464 FBXW7Q969H0 707 aa21.46■■□□□ 1.03
MRPL55-220ENST00000411464 GREM2Q9H772 168 aa21.46■■□□□ 1.03
MRPL55-220ENST00000411464 CASP8AP2Q9UKL3 1982 aa21.46■■□□□ 1.03
MRPL55-220ENST00000411464 SLC34A2O95436 690 aa21.45■■□□□ 1.02
MRPL55-220ENST00000411464 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
MRPL55-220ENST00000411464 SCAF8Q9UPN6 1271 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms