RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 WDR17Q8IZU2 1322 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 FAM196BA6NMK8 535 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 H3BRB1 525 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 LZTS3O60299 673 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 PEX14O75381 377 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 PARNO95453 639 aaKnown RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 CD46P15529 392 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 ANAPC15P60006 121 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 COPS2P61201 443 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 CTDSPL2Q05D32 466 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 MRPL58Q14197 206 aaKnown RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 EAPPQ56P03 285 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 FAM182BQ5T319 152 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 PRPF38BQ5VTL8 546 aaKnown RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 TEX2Q8IWB9 1127 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 NLGN1Q8N2Q7 840 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 NKX2-3Q8TAU0 364 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 IP6K1Q92551 441 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 ASB16Q96NS5 453 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 TUT1Q9H6E5 874 aaKnown RBP5.86□□□□□ -1.47
SF3B1-202ENST00000409915 NLRP2Q9NX02 1062 aa5.86□□□□□ -1.47
SF3B1-202ENST00000409915 BLMP54132 1417 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-202ENST00000409915 NSD2O96028 1365 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 FLT4P35916 1363 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 PER1O15534 1290 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-202ENST00000409915 ABL1P00519 1130 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 DNAJB2P25686 324 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 SLC4A3P48751 1232 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 HSP90AB4PQ58FF6 505 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 HSP90AB2PQ58FF8 381 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 USP17L2Q6R6M4 530 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 MORC1Q86VD1 984 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 NT5DC4Q86YG4 428 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 TCP11L2Q8N4U5 519 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 USHBP1Q8N6Y0 703 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 SLC43A3Q8NBI5 491 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 ZBTB3Q9H5J0 574 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 CAPN10Q9HC96 672 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 BRWD3Q6RI45 1802 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 LRRC37A3O60309 1634 aa5.85□□□□□ -1.47
SF3B1-202ENST00000409915 DISP2A7MBM2 1401 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 WNK3Q9BYP7 1800 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 A0A0U1RQG5 324 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 PIK3CDO00329 1044 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 MCCD1P59942 119 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 ZNF211Q13398 564 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 TCEAL1Q15170 157 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 CRTC2Q53ET0 693 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 KRT27Q7Z3Y8 459 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 ZSCAN29Q8IWY8 852 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 FAM200AQ8TCP9 573 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 EPS8L1Q8TE68 723 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 LRRN4Q8WUT4 740 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 ARMC5Q96C12 935 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 ZSWIM4Q9H7M6 989 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 CCSER2Q9H7U1 834 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 MAGEC2Q9UBF1 373 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 POLKQ9UBT6 870 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 RGPD2P0DJD1 1756 aa5.84□□□□□ -1.47
SF3B1-202ENST00000409915 FAM208AQ9UK61 1670 aaKnown RBP5.84□□□□□ -1.47
SF3B1-202ENST00000409915 SMG6Q86US8 1419 aaKnown RBP5.83□□□□□ -1.48
SF3B1-202ENST00000409915 INSRP06213 1382 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 TLL1O43897 1013 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 DDX10Q13206 875 aaKnown RBP5.83□□□□□ -1.48
SF3B1-202ENST00000409915 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 LDLRAD1Q5T700 205 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 NBPF6Q5VWK0 638 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 BLOC1S3Q6QNY0 202 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 METTL16Q86W50 562 aaKnown RBP5.83□□□□□ -1.48
SF3B1-202ENST00000409915 GLYCTKQ8IVS8 523 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 SLF2Q8IX21 1173 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 NBPF4Q96M43 638 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 CARD10Q9BWT7 1032 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 ANO2Q9NQ90 1003 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 EGFL7Q9UHF1 273 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 DCTN4Q9UJW0 460 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 NOP58Q9Y2X3 529 aaKnown RBP5.83□□□□□ -1.48
SF3B1-202ENST00000409915 MEGF6O75095 1541 aa5.83□□□□□ -1.48
SF3B1-202ENST00000409915 TNS2Q63HR2 1409 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 PARP4Q9UKK3 1724 aaKnown RBP5.82□□□□□ -1.48
SF3B1-202ENST00000409915 CCDC194A0A1B0GVG4 234 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 USP17L5A8MUK1 530 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 CFHP08603 1231 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 SKIP12755 728 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 EIF4A2Q14240 407 aaKnown RBP5.82□□□□□ -1.48
SF3B1-202ENST00000409915 TMEM87AQ8NBN3 555 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 PNMA1Q8ND90 353 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 ZCRB1Q8TBF4 217 aaKnown RBP5.82□□□□□ -1.48
SF3B1-202ENST00000409915 TSC1Q92574 1164 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 TGIF2Q9GZN2 237 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 CHPF2Q9P2E5 772 aa5.82□□□□□ -1.48
SF3B1-202ENST00000409915 THRAP3Q9Y2W1 955 aaKnown RBP5.82□□□□□ -1.48
SF3B1-202ENST00000409915 MAP2P11137 1827 aaKnown RBP5.82□□□□□ -1.48
SF3B1-202ENST00000409915 KIF24Q5T7B8 1368 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 NPC1L1Q9UHC9 1359 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 ICMTO60725 284 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms