RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 SUPT20HQ8NEM7 779 aa21.7■■□□□ 1.06
HDAC11-202ENST00000402259 ZNF594Q96JF6 807 aaPredicted RBP21.7■■□□□ 1.06
HDAC11-202ENST00000402259 VPS33BQ9H267 617 aa21.7■■□□□ 1.06
HDAC11-202ENST00000402259 DICER1Q9UPY3 1922 aaKnown RBP21.7■■□□□ 1.06
HDAC11-202ENST00000402259 CCDC88AQ3V6T2 1871 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 SRGAP3O43295 1099 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 GPSM2P81274 684 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 ATP8B2P98198 1209 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 PTPN12Q05209 780 aaKnown RBP21.69■■□□□ 1.06
HDAC11-202ENST00000402259 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 ANKRD2Q9GZV1 360 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 COPRSQ9NQ92 184 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 XDHP47989 1333 aa21.69■■□□□ 1.06
HDAC11-202ENST00000402259 GOLGB1Q14789 3259 aaKnown RBP21.69■■□□□ 1.06
HDAC11-202ENST00000402259 LMNB1P20700 586 aa21.68■■□□□ 1.06
HDAC11-202ENST00000402259 RASSF7Q02833 373 aa21.68■■□□□ 1.06
HDAC11-202ENST00000402259 SSH3Q8TE77 659 aa21.68■■□□□ 1.06
HDAC11-202ENST00000402259 C1orf115Q9H7X2 142 aa21.68■■□□□ 1.06
HDAC11-202ENST00000402259 CNNM1Q9NRU3 951 aa21.68■■□□□ 1.06
HDAC11-202ENST00000402259 NSFL1CQ9UNZ2 370 aaKnown RBP21.68■■□□□ 1.06
HDAC11-202ENST00000402259 AAMPQ13685 434 aa21.67■■□□□ 1.06
HDAC11-202ENST00000402259 POLA2Q14181 598 aa21.67■■□□□ 1.06
HDAC11-202ENST00000402259 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
HDAC11-202ENST00000402259 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
HDAC11-202ENST00000402259 RIPOR2Q9Y4F9 1068 aa21.67■■□□□ 1.06
HDAC11-202ENST00000402259 MROH5Q6ZUA9 1318 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 PNMA6EA0A0J9YXQ4 647 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 EYA2O00167 538 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 CIAO1O76071 339 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 ATP2B4P23634 1241 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 CHRNDQ07001 517 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 ANKIB1Q9P2G1 1089 aa21.66■■□□□ 1.06
HDAC11-202ENST00000402259 CENPBP07199 599 aaPredicted RBP21.65■■□□□ 1.06
HDAC11-202ENST00000402259 IARSP41252 1262 aaKnown RBP21.65■■□□□ 1.06
HDAC11-202ENST00000402259 TBC1D16Q8TBP0 767 aa21.65■■□□□ 1.06
HDAC11-202ENST00000402259 CRBNQ96SW2 442 aa21.65■■□□□ 1.06
HDAC11-202ENST00000402259 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
HDAC11-202ENST00000402259 GGA1Q9UJY5 639 aa21.65■■□□□ 1.06
HDAC11-202ENST00000402259 LEMD3Q9Y2U8 911 aa21.65■■□□□ 1.06
HDAC11-202ENST00000402259 ZC3H4Q9UPT8 1303 aaKnown RBP21.64■■□□□ 1.05
HDAC11-202ENST00000402259 PRELPP51888 382 aa21.64■■□□□ 1.05
HDAC11-202ENST00000402259 KLHDC4Q8TBB5 520 aa21.64■■□□□ 1.05
HDAC11-202ENST00000402259 EYA3Q99504 573 aa21.64■■□□□ 1.05
HDAC11-202ENST00000402259 POLLQ9UGP5 575 aa21.64■■□□□ 1.05
HDAC11-202ENST00000402259 LRRC24Q50LG9 513 aa21.63■■□□□ 1.05
HDAC11-202ENST00000402259 ZNF277Q9NRM2 450 aaPredicted RBP21.63■■□□□ 1.05
HDAC11-202ENST00000402259 C6orf229H3BNL8 230 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 HMMRO75330 724 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 UFL1O94874 794 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 IL15P40933 162 aaPredicted RBP21.62■■□□□ 1.05
HDAC11-202ENST00000402259 KIAA2012Q0VF49 1180 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 C9orf131Q5VYM1 1079 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 ATG9AQ7Z3C6 839 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 RNF181Q9P0P0 153 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 PA2G4Q9UQ80 394 aaKnown RBP21.62■■□□□ 1.05
HDAC11-202ENST00000402259 TIAM2Q8IVF5 1701 aa21.62■■□□□ 1.05
HDAC11-202ENST00000402259 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
HDAC11-202ENST00000402259 ZNF804BA4D1E1 1349 aa21.6■■□□□ 1.05
HDAC11-202ENST00000402259 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
HDAC11-202ENST00000402259 WASHC4Q2M389 1173 aa21.6■■□□□ 1.05
HDAC11-202ENST00000402259 METTL24Q5JXM2 366 aa21.6■■□□□ 1.05
HDAC11-202ENST00000402259 C15orf52Q6ZUT6 534 aaKnown RBP21.6■■□□□ 1.05
HDAC11-202ENST00000402259 VGLL2Q8N8G2 317 aa21.6■■□□□ 1.05
HDAC11-202ENST00000402259 NOP58Q9Y2X3 529 aaKnown RBP21.6■■□□□ 1.05
HDAC11-202ENST00000402259 PDE8BO95263 885 aa21.59■■□□□ 1.05
HDAC11-202ENST00000402259 UBE4AQ14139 1066 aa21.59■■□□□ 1.05
HDAC11-202ENST00000402259 SIRT2Q8IXJ6 389 aa21.59■■□□□ 1.05
HDAC11-202ENST00000402259 LARGE2Q8N3Y3 721 aa21.59■■□□□ 1.05
HDAC11-202ENST00000402259 ZC3H12CQ9C0D7 883 aaKnown RBP21.59■■□□□ 1.05
HDAC11-202ENST00000402259 SIL1Q9H173 461 aa21.59■■□□□ 1.05
HDAC11-202ENST00000402259 TAF5LO75529 589 aa21.58■■□□□ 1.05
HDAC11-202ENST00000402259 KCNJ4P48050 445 aa21.58■■□□□ 1.05
HDAC11-202ENST00000402259 AOC3Q16853 763 aa21.58■■□□□ 1.05
HDAC11-202ENST00000402259 HELBQ8NG08 1087 aaPredicted RBP21.58■■□□□ 1.05
HDAC11-202ENST00000402259 JDP2Q8WYK2 163 aa21.58■■□□□ 1.05
HDAC11-202ENST00000402259 UTRNP46939 3433 aa21.58■■□□□ 1.04
HDAC11-202ENST00000402259 COL4A5P29400 1685 aa21.57■■□□□ 1.04
HDAC11-202ENST00000402259 G3BP1Q13283 466 aaKnown RBP eCLIP21.57■■□□□ 1.04
HDAC11-202ENST00000402259 CEP126Q9P2H0 1117 aa21.57■■□□□ 1.04
HDAC11-202ENST00000402259 IRS2Q9Y4H2 1338 aa21.56■■□□□ 1.04
HDAC11-202ENST00000402259 NIM1KQ8IY84 436 aa21.56■■□□□ 1.04
HDAC11-202ENST00000402259 FZD9O00144 591 aa21.55■■□□□ 1.04
HDAC11-202ENST00000402259 SURF6O75683 361 aaKnown RBP21.55■■□□□ 1.04
HDAC11-202ENST00000402259 PUM3Q15397 648 aaKnown RBP21.55■■□□□ 1.04
HDAC11-202ENST00000402259 HSP90AB4PQ58FF6 505 aa21.55■■□□□ 1.04
HDAC11-202ENST00000402259 EXOC6Q8TAG9 804 aa21.55■■□□□ 1.04
HDAC11-202ENST00000402259 WTIPA6NIX2 430 aaPredicted RBP21.54■■□□□ 1.04
HDAC11-202ENST00000402259 FGFR2P21802 821 aa21.54■■□□□ 1.04
HDAC11-202ENST00000402259 GPR101Q96P66 508 aaPredicted RBP21.54■■□□□ 1.04
HDAC11-202ENST00000402259 PCDHB15Q9Y5E8 787 aa21.54■■□□□ 1.04
HDAC11-202ENST00000402259 RIMBP2O15034 1052 aa21.53■■□□□ 1.04
HDAC11-202ENST00000402259 ERC1Q8IUD2 1116 aa21.53■■□□□ 1.04
HDAC11-202ENST00000402259 LPIN2Q92539 896 aa21.53■■□□□ 1.04
HDAC11-202ENST00000402259 ZNRF3Q9ULT6 936 aa21.53■■□□□ 1.04
HDAC11-202ENST00000402259 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
HDAC11-202ENST00000402259 ARAP2Q8WZ64 1704 aa21.52■■□□□ 1.04
HDAC11-202ENST00000402259 SNAP23O00161 211 aa21.52■■□□□ 1.04
HDAC11-202ENST00000402259 SASH1O94885 1247 aa21.52■■□□□ 1.04
HDAC11-202ENST00000402259 COA1Q9GZY4 146 aa21.52■■□□□ 1.04
HDAC11-202ENST00000402259 GPR108Q9NPR9 543 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms