RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 V9GY48 417 aaPredicted RBP8.27□□□□□ -1.09
PTPN20-208ENST00000395727 UBR2Q8IWV8 1755 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 VIRMAQ69YN4 1812 aaKnown RBP8.26□□□□□ -1.09
PTPN20-208ENST00000395727 DIAPH1O60610 1272 aaKnown RBP8.26□□□□□ -1.09
PTPN20-208ENST00000395727 CTHP32929 405 aa8.26□□□□□ -1.09
PTPN20-208ENST00000395727 ITPK1Q13572 414 aa8.26□□□□□ -1.09
PTPN20-208ENST00000395727 MCM6Q14566 821 aa8.26□□□□□ -1.09
PTPN20-208ENST00000395727 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
PTPN20-208ENST00000395727 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
PTPN20-208ENST00000395727 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
PTPN20-208ENST00000395727 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
PTPN20-208ENST00000395727 KIF13BQ9NQT8 1826 aa8.25□□□□□ -1.09
PTPN20-208ENST00000395727 CABP4P57796 275 aa8.25□□□□□ -1.09
PTPN20-208ENST00000395727 TRIM32Q13049 653 aa8.25□□□□□ -1.09
PTPN20-208ENST00000395727 NR6A1Q15406 480 aa8.25□□□□□ -1.09
PTPN20-208ENST00000395727 CC2D1BQ5T0F9 858 aaKnown RBP8.25□□□□□ -1.09
PTPN20-208ENST00000395727 EPS8L1Q8TE68 723 aa8.25□□□□□ -1.09
PTPN20-208ENST00000395727 KCPQ6ZWJ8 1503 aa8.24□□□□□ -1.09
PTPN20-208ENST00000395727 ZBTB24O43167 697 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-208ENST00000395727 FLIIQ13045 1269 aa8.24□□□□□ -1.09
PTPN20-208ENST00000395727 SPRYD7Q5W111 196 aa8.24□□□□□ -1.09
PTPN20-208ENST00000395727 AMIGO3Q86WK7 504 aa8.24□□□□□ -1.09
PTPN20-208ENST00000395727 SLC4A9Q96Q91 983 aa8.24□□□□□ -1.09
PTPN20-208ENST00000395727 CD2APQ9Y5K6 639 aa8.24□□□□□ -1.09
PTPN20-208ENST00000395727 CHD4Q14839 1912 aa8.23□□□□□ -1.09
PTPN20-208ENST00000395727 YY1P25490 414 aa8.23□□□□□ -1.09
PTPN20-208ENST00000395727 SLC52A2Q9HAB3 445 aa8.23□□□□□ -1.09
PTPN20-208ENST00000395727 KIAA1551Q9HCM1 1747 aa8.23□□□□□ -1.09
PTPN20-208ENST00000395727 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 GPR37L1O60883 481 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 RPS6KA4O75676 772 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 CD2BP2O95400 341 aaKnown RBP8.22□□□□□ -1.09
PTPN20-208ENST00000395727 MTHFSDQ2M296 383 aaKnown RBP8.22□□□□□ -1.09
PTPN20-208ENST00000395727 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 RTCBQ9Y3I0 505 aaKnown RBP8.22□□□□□ -1.09
PTPN20-208ENST00000395727 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
PTPN20-208ENST00000395727 C10orf71Q711Q0 1435 aa8.21□□□□□ -1.09
PTPN20-208ENST00000395727 MYH14Q7Z406 1995 aaKnown RBP8.21□□□□□ -1.09
PTPN20-208ENST00000395727 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
PTPN20-208ENST00000395727 HMOX1P09601 288 aa8.21□□□□□ -1.1
PTPN20-208ENST00000395727 SKOR1P84550 965 aa8.21□□□□□ -1.1
PTPN20-208ENST00000395727 NLGN1Q8N2Q7 840 aa8.21□□□□□ -1.1
PTPN20-208ENST00000395727 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
PTPN20-208ENST00000395727 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
PTPN20-208ENST00000395727 BAP1Q92560 729 aa8.21□□□□□ -1.1
PTPN20-208ENST00000395727 APBB1O00213 710 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 GRIN3BO60391 1043 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 PPP2R1AP30153 589 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 WNT7BP56706 349 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 SH3BP2P78314 561 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 TRAPPC3LQ5T215 181 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 ZNF598Q86UK7 904 aaKnown RBP8.2□□□□□ -1.1
PTPN20-208ENST00000395727 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 NLGN2Q8NFZ4 835 aa8.2□□□□□ -1.1
PTPN20-208ENST00000395727 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.1
PTPN20-208ENST00000395727 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
PTPN20-208ENST00000395727 GNAT3A8MTJ3 354 aa8.19□□□□□ -1.1
PTPN20-208ENST00000395727 GYS1P13807 737 aa8.19□□□□□ -1.1
PTPN20-208ENST00000395727 CRKLP46109 303 aaKnown RBP8.19□□□□□ -1.1
PTPN20-208ENST00000395727 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
PTPN20-208ENST00000395727 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
PTPN20-208ENST00000395727 NRXN2Q9P2S2 1712 aa8.19□□□□□ -1.1
PTPN20-208ENST00000395727 PXDNLA1KZ92 1463 aa8.19□□□□□ -1.1
PTPN20-208ENST00000395727 SCN7AQ01118 1682 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 BRCA1P38398 1863 aaKnown RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 U2SURPO15042 1029 aaKnown RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 PTCD1O75127 700 aaKnown RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 CYP19A1P11511 503 aaPredicted RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 GPR162Q16538 588 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 ZNF697Q5TEC3 545 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 PDXDC2PQ6P474 469 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 INTS5Q6P9B9 1019 aaKnown RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 CCDC87Q9NVE4 849 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 NDUFB9Q9Y6M9 179 aa8.18□□□□□ -1.1
PTPN20-208ENST00000395727 SOS1Q07889 1333 aaPredicted RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 USP42Q9H9J4 1324 aaKnown RBP8.18□□□□□ -1.1
PTPN20-208ENST00000395727 HTATSF1O43719 755 aaKnown RBP8.17□□□□□ -1.1
PTPN20-208ENST00000395727 YBX3P16989 372 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPN20-208ENST00000395727 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 RFC4P35249 363 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 TGFB2P61812 414 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 TEFQ10587 303 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 PNMA1Q8ND90 353 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 IL17REQ8NFR9 667 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 TEX13AQ9BXU3 409 aaPredicted RBP8.17□□□□□ -1.1
PTPN20-208ENST00000395727 TBC1D2BQ9UPU7 963 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 COL15A1P39059 1388 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 HEG1Q9ULI3 1381 aa8.17□□□□□ -1.1
PTPN20-208ENST00000395727 WNT7AO00755 349 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 ADCY9O60503 1353 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 MMP10P09238 476 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 ZNF790Q6PG37 636 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 TRIM67Q6ZTA4 783 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 SMIM5Q71RC9 77 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms