RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 ZRSR1Q15695 479 aaKnown RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 TMC6Q7Z403 805 aa19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 DNAJC2Q99543 621 aaKnown RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 ALDH8A1Q9H2A2 487 aaPredicted RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 KRT32Q14532 448 aa19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 E4F1Q66K89 784 aaPredicted RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 KAZALD1Q96I82 304 aa19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 NOL10Q9BSC4 688 aaKnown RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 RCOR1Q9UKL0 485 aa19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 GRM8O00222 908 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 KSR2Q6VAB6 950 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 LRRC37A3O60309 1634 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 BIN1O00499 593 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 ALDH1L1O75891 902 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 FAM160A1Q05DH4 1040 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 NBPF11Q86T75 865 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 TIGD1Q96MW7 591 aa19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 NCOA5Q9HCD5 579 aaKnown RBP19.18■□□□□ 0.66
EFEMP1-202ENST00000394555 A0A1B0GVL5 298 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 PPP1R13BQ96KQ4 1090 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 NAT10Q9H0A0 1025 aaKnown RBP19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 IFNKQ9P0W0 207 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 CYP21A2P08686 494 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 GSDMDP57764 484 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 APOBRQ0VD83 1088 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 XPO4Q9C0E2 1151 aaKnown RBP19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 BMS1Q14692 1282 aaKnown RBP19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 ARHGAP29Q52LW3 1261 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 SNRKQ9NRH2 765 aa19.17■□□□□ 0.66
EFEMP1-202ENST00000394555 N4BP2Q86UW6 1770 aaPredicted RBP19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 PTPDC1A2A3K4 754 aa19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 IRX5P78411 483 aaPredicted RBP19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 COL15A1P39059 1388 aa19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 LTKP29376 864 aa19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 CLCN6P51797 869 aa19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 TSGA10IPQ3SY00 556 aa19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 FAM53CQ9NYF3 392 aa19.16■□□□□ 0.66
EFEMP1-202ENST00000394555 KIF2AO00139 706 aaPredicted RBP19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 SFPQP23246 707 aaKnown RBP eCLIP19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 DPCR1Q3MIW9 517 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 SLFNL1Q499Z3 407 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 ARMCX5Q6P1M9 558 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 HOXB7P09629 217 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 FAM69CQ0P6D2 419 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 NBPF6Q5VWK0 638 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 ISM2Q6H9L7 571 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 NSUN7Q8NE18 718 aaKnown RBP19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 ENGASEQ8NFI3 743 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 NBPF4Q96M43 638 aa19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 CHD2O14647 1828 aaKnown RBP19.15■□□□□ 0.66
EFEMP1-202ENST00000394555 CHST3Q7LGC8 479 aa19.14■□□□□ 0.66
EFEMP1-202ENST00000394555 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.66
EFEMP1-202ENST00000394555 POLR3GO15318 223 aaPredicted RBP19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 ZNF396Q96N95 335 aaPredicted RBP19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 SF3A1Q15459 793 aaKnown RBP19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 DDX46Q7L014 1031 aaKnown RBP19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 DNAI1Q9UI46 699 aa19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 TAOK2Q9UL54 1235 aa19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 CEMIPQ8WUJ3 1361 aa19.14■□□□□ 0.65
EFEMP1-202ENST00000394555 CTDNEP1O95476 244 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 USPL1Q5W0Q7 1092 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 FHOD1Q9Y613 1164 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 H2AFXP16104 143 aaPredicted RBP19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 STOX1Q6ZVD7 989 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 LINS1Q8NG48 757 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 SMARCC2Q8TAQ2 1214 aa19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.13■□□□□ 0.65
EFEMP1-202ENST00000394555 NDUFA8P51970 172 aa19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 OSBPL5Q9H0X9 879 aaPredicted RBP19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 U3KPZ7 1027 aaPredicted RBP19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 OTUD7BQ6GQQ9 843 aa19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 MRPS27Q92552 414 aaKnown RBP19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 L2HGDHQ9H9P8 463 aa19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 CALCOCO1Q9P1Z2 691 aa19.12■□□□□ 0.65
EFEMP1-202ENST00000394555 PFKFB2O60825 505 aa19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 LRRC59Q96AG4 307 aaKnown RBP19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 DBNLQ9UJU6 430 aaKnown RBP19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 POLR3DP05423 398 aaPredicted RBP19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 FAM177A1Q8N128 213 aaPredicted RBP19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 UBXN4Q92575 508 aa19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 LMOD1P29536 600 aaPredicted RBP19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 IMPACTQ9P2X3 320 aa19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 TOPAZ1Q8N9V7 1692 aa19.11■□□□□ 0.65
EFEMP1-202ENST00000394555 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 NRDCO43847 1150 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 PTPN21Q16825 1174 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms