RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 RAB6BQ9NRW1 208 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 CDKN2AIPQ9NXV6 580 aaPredicted RBP2□□□□□ -2.09
RNU1-78P-201ENST00000391248 PPP4R2Q9NY27 417 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 CABP1Q9NZU7 370 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 PRKAG3Q9UGI9 489 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 NOB1Q9ULX3 412 aaKnown RBP2□□□□□ -2.09
RNU1-78P-201ENST00000391248 PPT2Q9UMR5 302 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 ZNF232Q9UNY5 417 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 BCS1LQ9Y276 419 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 PCDHB3Q9Y5E6 796 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 CD2APQ9Y5K6 639 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 COMMD10Q9Y6G5 202 aa2□□□□□ -2.09
RNU1-78P-201ENST00000391248 SHTN1A0MZ66 631 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 HMGB1P1B2RPK0 211 aaPredicted RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TLR3O15455 904 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 KATNA1O75449 491 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TNFRSF21O75509 655 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TRIM37O94972 964 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 KIF4AO95239 1232 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 VIL1P09327 827 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 FAM153BP0C7A2 387 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 GARTP22102 1010 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 MCM4P33991 863 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 GUCY2FP51841 1108 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 ERVK-9P63128 1117 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 CENPCQ03188 943 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SAFB2Q14151 953 aaKnown RBP eCLIP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 DHX8Q14562 1220 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 ARID5BQ14865 1188 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 PPP2R5AQ15172 486 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TTF1Q15361 905 aaPredicted RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 CCDC85BQ15834 202 aaPredicted RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 PPP2R5EQ16537 467 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 LONRF3Q496Y0 759 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 MSS51Q4VC12 460 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SEZ6Q53EL9 994 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TTC39BQ5VTQ0 682 aaPredicted RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 PCNX4Q63HM2 1172 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 PRPF40BQ6NWY9 871 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 STRA8Q7Z7C7 330 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 LAPTM4BQ86VI4 370 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SEPT12Q8IYM1 358 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 CHPFQ8IZ52 775 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 CNPY4Q8N129 248 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 CMTR1Q8N1G2 835 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TMTC2Q8N394 836 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 GPATCH11Q8N954 259 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 C1orf127Q8N9H9 656 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 ZNF511Q8NB15 262 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 GOLM1Q8NBJ4 401 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 FBXO27Q8NI29 283 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TTC8Q8TAM2 541 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 C7orf43Q8WVR3 580 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 JARID2Q92833 1246 aaPredicted RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 L3MBTL2Q969R5 705 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 PLD4Q96BZ4 506 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 KLRG1Q96E93 195 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SLC10A4Q96EP9 437 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 LRCH3Q96II8 777 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SHDQ96IW2 340 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 NEUROD6Q96NK8 337 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 CRBNQ96SW2 442 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SRRTQ9BXP5 876 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 SLC4A5Q9BY07 1137 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 ENAMQ9NRM1 1142 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TYW1Q9NV66 732 aaKnown RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 BSDC1Q9NW68 430 aaPredicted RBP1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 TMEM260Q9NX78 707 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 FAM8A1Q9UBU6 413 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 AKAP2Q9Y2D5 859 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 MSRB2Q9Y3D2 182 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 RPS6KL1Q9Y6S9 549 aa1.99□□□□□ -2.09
RNU1-78P-201ENST00000391248 A0A087X0B3 334 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 EML1O00423 815 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 EREGO14944 169 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 PRPF3O43395 683 aaKnown RBP1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 KCNQ2O43526 872 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 FBXO24O75426 580 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 DDAH1O94760 285 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 GJB6O95452 261 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 GNRH1P01148 92 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 IL2RAP01589 272 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 FGAP02671 866 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 L1CAMP32004 1257 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 GRM5P41594 1212 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 CRKP46108 304 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 GIPRP48546 466 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 FCGRTP55899 365 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 EIF6P56537 245 aaKnown RBP1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 PSMA6P60900 246 aaKnown RBP1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 APOBRQ0VD83 1088 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 HDAC1Q13547 482 aaPredicted RBP1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 CAMK2GQ13555 558 aaPredicted RBP1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 RASGRF1Q13972 1273 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 GRM2Q14416 872 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 MTFR1Q15390 333 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 TCEA2Q15560 299 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 TEAD4Q15561 434 aa1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 ZRSR2Q15696 482 aaKnown RBP1.98□□□□□ -2.09
RNU1-78P-201ENST00000391248 DDR2Q16832 855 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms