RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 RBM26Q5T8P6 1007 aaKnown RBP29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 KRT26Q7Z3Y9 468 aa29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 CFAP44Q96MT7 982 aa29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 SEC31BQ9NQW1 1179 aa29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 MBIPQ9NS73 344 aa29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 HYPKQ9NX55 129 aa29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 ASTN2O75129 1339 aaPredicted RBP29.71■■■□□ 2.35
CDKN2B-202ENST00000380142 RPS8P62241 208 aaKnown RBP29.7■■■□□ 2.35
CDKN2B-202ENST00000380142 AKAP11Q9UKA4 1901 aa29.7■■■□□ 2.34
CDKN2B-202ENST00000380142 RPS12P25398 132 aaKnown RBP29.69■■■□□ 2.34
CDKN2B-202ENST00000380142 PHAXQ9H814 394 aaKnown RBP29.69■■■□□ 2.34
CDKN2B-202ENST00000380142 GBA2Q9HCG7 927 aaPredicted RBP29.69■■■□□ 2.34
CDKN2B-202ENST00000380142 ZNF853P0CG23 659 aa29.68■■■□□ 2.34
CDKN2B-202ENST00000380142 MLLT1Q03111 559 aaPredicted RBP29.68■■■□□ 2.34
CDKN2B-202ENST00000380142 RGMBQ6NW40 437 aa29.68■■■□□ 2.34
CDKN2B-202ENST00000380142 VIL1P09327 827 aaKnown RBP29.67■■■□□ 2.34
CDKN2B-202ENST00000380142 DDX10Q13206 875 aaKnown RBP29.67■■■□□ 2.34
CDKN2B-202ENST00000380142 EYA3Q99504 573 aa29.67■■■□□ 2.34
CDKN2B-202ENST00000380142 PODXL2Q9NZ53 605 aa29.67■■■□□ 2.34
CDKN2B-202ENST00000380142 ZNF646O15015 1829 aaPredicted RBP29.66■■■□□ 2.34
CDKN2B-202ENST00000380142 DGKZQ13574 1117 aa29.66■■■□□ 2.34
CDKN2B-202ENST00000380142 KIF4BQ2VIQ3 1234 aa29.66■■■□□ 2.34
CDKN2B-202ENST00000380142 ZBTB38Q8NAP3 1195 aaPredicted RBP29.66■■■□□ 2.34
CDKN2B-202ENST00000380142 SLC34A2O95436 690 aa29.65■■■□□ 2.34
CDKN2B-202ENST00000380142 SPEF2Q9C093 1822 aa29.64■■■□□ 2.34
CDKN2B-202ENST00000380142 JARID2Q92833 1246 aaPredicted RBP29.64■■■□□ 2.34
CDKN2B-202ENST00000380142 DCPSQ96C86 337 aaKnown RBP29.64■■■□□ 2.34
CDKN2B-202ENST00000380142 KIF23Q02241 960 aaPredicted RBP29.63■■■□□ 2.33
CDKN2B-202ENST00000380142 WDR43Q15061 677 aaKnown RBP eCLIP29.63■■■□□ 2.33
CDKN2B-202ENST00000380142 RIC3Q7Z5B4 369 aa29.63■■■□□ 2.33
CDKN2B-202ENST00000380142 GGA3Q9NZ52 723 aa29.63■■■□□ 2.33
CDKN2B-202ENST00000380142 ZNF609O15014 1411 aa29.62■■■□□ 2.33
CDKN2B-202ENST00000380142 UFL1O94874 794 aa29.62■■■□□ 2.33
CDKN2B-202ENST00000380142 C2orf69Q8N8R5 385 aa29.62■■■□□ 2.33
CDKN2B-202ENST00000380142 MYD88Q99836 296 aa29.62■■■□□ 2.33
CDKN2B-202ENST00000380142 ZC3H12CQ9C0D7 883 aaKnown RBP29.62■■■□□ 2.33
CDKN2B-202ENST00000380142 TNRC18O15417 2968 aaPredicted RBP29.61■■■□□ 2.33
CDKN2B-202ENST00000380142 MYH3P11055 1940 aa29.61■■■□□ 2.33
CDKN2B-202ENST00000380142 ELL2O00472 640 aaPredicted RBP29.6■■■□□ 2.33
CDKN2B-202ENST00000380142 CCDC85AQ96PX6 553 aaPredicted RBP29.6■■■□□ 2.33
CDKN2B-202ENST00000380142 ZNF280AP59817 542 aaPredicted RBP29.59■■■□□ 2.33
CDKN2B-202ENST00000380142 GOLGA2Q08379 1002 aa29.59■■■□□ 2.33
CDKN2B-202ENST00000380142 CDCA5Q96FF9 252 aa29.59■■■□□ 2.33
CDKN2B-202ENST00000380142 WTIPA6NIX2 430 aaPredicted RBP29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 PCCAP05165 728 aaPredicted RBP29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 SLC10A3P09131 477 aa29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 ZNF157P51786 506 aaPredicted RBP29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 CCDC102AQ96A19 550 aa29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 GMLQ99445 158 aa29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 RNF186Q9NXI6 227 aa29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 GGA1Q9UJY5 639 aa29.58■■■□□ 2.33
CDKN2B-202ENST00000380142 RSBN1LQ6PCB5 846 aaPredicted RBP29.57■■■□□ 2.32
CDKN2B-202ENST00000380142 C8orf58Q8NAV2 365 aa29.57■■■□□ 2.32
CDKN2B-202ENST00000380142 CCDC191Q8NCU4 936 aa29.57■■■□□ 2.32
CDKN2B-202ENST00000380142 SAGE1Q9NXZ1 904 aa29.57■■■□□ 2.32
CDKN2B-202ENST00000380142 ANKIB1Q9P2G1 1089 aa29.57■■■□□ 2.32
CDKN2B-202ENST00000380142 PDE8AO60658 829 aa29.56■■■□□ 2.32
CDKN2B-202ENST00000380142 SULF1Q8IWU6 871 aa29.56■■■□□ 2.32
CDKN2B-202ENST00000380142 CSRNP1Q96S65 589 aa29.56■■■□□ 2.32
CDKN2B-202ENST00000380142 IFT57Q9NWB7 429 aa29.56■■■□□ 2.32
CDKN2B-202ENST00000380142 PAPPA2Q9BXP8 1791 aa29.55■■■□□ 2.32
CDKN2B-202ENST00000380142 SCARF1Q14162 830 aa29.55■■■□□ 2.32
CDKN2B-202ENST00000380142 ANGEL2Q5VTE6 544 aaKnown RBP29.55■■■□□ 2.32
CDKN2B-202ENST00000380142 AGBL3Q8NEM8 1001 aa29.55■■■□□ 2.32
CDKN2B-202ENST00000380142 APAF1O14727 1248 aa29.54■■■□□ 2.32
CDKN2B-202ENST00000380142 TRPA1O75762 1119 aa29.54■■■□□ 2.32
CDKN2B-202ENST00000380142 CCDC152Q4G0S7 254 aa29.54■■■□□ 2.32
CDKN2B-202ENST00000380142 METTL22Q9BUU2 404 aaPredicted RBP29.54■■■□□ 2.32
CDKN2B-202ENST00000380142 SCAF8Q9UPN6 1271 aaKnown RBP29.54■■■□□ 2.32
CDKN2B-202ENST00000380142 CWC25Q9NXE8 425 aaPredicted RBP29.53■■■□□ 2.32
CDKN2B-202ENST00000380142 RASAL3Q86YV0 1011 aa29.52■■■□□ 2.32
CDKN2B-202ENST00000380142 XDHP47989 1333 aa29.51■■■□□ 2.32
CDKN2B-202ENST00000380142 G3V3G9 751 aa29.51■■■□□ 2.31
CDKN2B-202ENST00000380142 GNAI1P63096 354 aa29.51■■■□□ 2.31
CDKN2B-202ENST00000380142 DCAF8Q5TAQ9 597 aa29.51■■■□□ 2.31
CDKN2B-202ENST00000380142 MOB2Q70IA6 237 aa29.5■■■□□ 2.31
CDKN2B-202ENST00000380142 ANKRD18AQ8IVF6 992 aa29.5■■■□□ 2.31
CDKN2B-202ENST00000380142 TSPYL6Q8N831 410 aa29.5■■■□□ 2.31
CDKN2B-202ENST00000380142 MYOZ2Q9NPC6 264 aa29.5■■■□□ 2.31
CDKN2B-202ENST00000380142 IGKV5-2P06315 115 aa29.49■■■□□ 2.31
CDKN2B-202ENST00000380142 HSP90B1P14625 803 aaKnown RBP29.49■■■□□ 2.31
CDKN2B-202ENST00000380142 USP17L8P0C7I0 530 aa29.48■■■□□ 2.31
CDKN2B-202ENST00000380142 ATP2B4P23634 1241 aa29.48■■■□□ 2.31
CDKN2B-202ENST00000380142 MXD3Q9BW11 206 aa29.48■■■□□ 2.31
CDKN2B-202ENST00000380142 PRKRIP1Q9H875 184 aaPredicted RBP29.48■■■□□ 2.31
CDKN2B-202ENST00000380142 MAP3K2Q9Y2U5 619 aa29.48■■■□□ 2.31
CDKN2B-202ENST00000380142 PDE4DIPQ5VU43 2346 aa29.48■■■□□ 2.31
CDKN2B-202ENST00000380142 USP17L3A6NCW0 530 aa29.47■■■□□ 2.31
CDKN2B-202ENST00000380142 USP17L4A6NCW7 530 aa29.47■■■□□ 2.31
CDKN2B-202ENST00000380142 USP17L1Q7RTZ2 530 aa29.47■■■□□ 2.31
CDKN2B-202ENST00000380142 PITPNM2Q9BZ72 1349 aa29.46■■■□□ 2.31
CDKN2B-202ENST00000380142 CTSWP56202 376 aa29.46■■■□□ 2.31
CDKN2B-202ENST00000380142 PRAMEF18Q5VWM3 479 aa29.46■■■□□ 2.31
CDKN2B-202ENST00000380142 PODNQ7Z5L7 613 aa29.46■■■□□ 2.31
CDKN2B-202ENST00000380142 TTLL11Q8NHH1 800 aa29.46■■■□□ 2.31
CDKN2B-202ENST00000380142 NBPF9Q3BBW0 867 aa29.45■■■□□ 2.31
CDKN2B-202ENST00000380142 GREM2Q9H772 168 aa29.45■■■□□ 2.31
CDKN2B-202ENST00000380142 MINPP1Q9UNW1 487 aa29.45■■■□□ 2.31
CDKN2B-202ENST00000380142 MED23Q9ULK4 1368 aa29.44■■■□□ 2.3
CDKN2B-202ENST00000380142 SOX10P56693 466 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms