RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
COL16A1-202ENST00000373668 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
COL16A1-202ENST00000373668 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
COL16A1-202ENST00000373668 XRN1Q8IZH2 1706 aaKnown RBP16.34■□□□□ 0.21
COL16A1-202ENST00000373668 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
COL16A1-202ENST00000373668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL16A1-202ENST00000373668 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
COL16A1-202ENST00000373668 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
COL16A1-202ENST00000373668 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
COL16A1-202ENST00000373668 NLRP10Q86W26 655 aa16.34■□□□□ 0.21
COL16A1-202ENST00000373668 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
COL16A1-202ENST00000373668 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.21
COL16A1-202ENST00000373668 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.21
COL16A1-202ENST00000373668 USP48Q86UV5 1035 aa16.33■□□□□ 0.21
COL16A1-202ENST00000373668 GJD4Q96KN9 370 aaPredicted RBP16.33■□□□□ 0.21
COL16A1-202ENST00000373668 ZDHHC9Q9Y397 364 aa16.33■□□□□ 0.21
COL16A1-202ENST00000373668 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.21
COL16A1-202ENST00000373668 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.21
COL16A1-202ENST00000373668 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.21
COL16A1-202ENST00000373668 DYNC1I1O14576 645 aa16.33■□□□□ 0.2
COL16A1-202ENST00000373668 MTERF4Q7Z6M4 381 aaKnown RBP16.33■□□□□ 0.2
COL16A1-202ENST00000373668 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
COL16A1-202ENST00000373668 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.2
COL16A1-202ENST00000373668 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
COL16A1-202ENST00000373668 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
COL16A1-202ENST00000373668 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 EVI5LQ96CN4 794 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 C6orf229H3BNL8 230 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 ZNF500O60304 480 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 ADCY5O95622 1261 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 MCM5P33992 734 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 CBX1P83916 185 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 PTH1RQ03431 593 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 NLRP3Q96P20 1036 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 GPR101Q96P66 508 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 TRPC5Q9UL62 973 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-202ENST00000373668 ADGRB2O60241 1585 aa16.32■□□□□ 0.2
COL16A1-202ENST00000373668 F8W031 263 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-202ENST00000373668 IL25Q9H293 177 aa16.31■□□□□ 0.2
COL16A1-202ENST00000373668 A0A0D9SFI3 127 aa16.31■□□□□ 0.2
COL16A1-202ENST00000373668 ZAP70P43403 619 aa16.31■□□□□ 0.2
COL16A1-202ENST00000373668 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
COL16A1-202ENST00000373668 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
COL16A1-202ENST00000373668 RNF20Q5VTR2 975 aa16.31■□□□□ 0.2
COL16A1-202ENST00000373668 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
COL16A1-202ENST00000373668 CPDO75976 1380 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
COL16A1-202ENST00000373668 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 CLEC17AQ6ZS10 378 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
COL16A1-202ENST00000373668 CCDC144CPQ8IYA2 1237 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 KNDC1Q76NI1 1749 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
COL16A1-202ENST00000373668 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
COL16A1-202ENST00000373668 DCCP43146 1447 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
COL16A1-202ENST00000373668 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 GYG1P46976 350 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 GUCY1B3Q02153 619 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 BLOC1S2Q6QNY1 142 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 PDRG1Q9NUG6 133 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 SPATA31A5Q5VU36 1347 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 SPATA31A7Q8IWB4 1347 aa16.29■□□□□ 0.2
COL16A1-202ENST00000373668 BCAMP50895 628 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 HMGN5P82970 282 aaKnown RBP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 RALYLQ86SE5 291 aaKnown RBP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 WTIPA6NIX2 430 aaPredicted RBP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 PDE8AO60658 829 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 CYP2E1P05181 493 aaPredicted RBP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 KRT27Q7Z3Y8 459 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
COL16A1-202ENST00000373668 NFAT5O94916 1531 aa16.28■□□□□ 0.2
COL16A1-202ENST00000373668 BRD1O95696 1058 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 CTSWP56202 376 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 POLA2Q14181 598 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 PDLIM2Q96JY6 352 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 GOLGA6L6A8MZA4 724 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-202ENST00000373668 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
COL16A1-202ENST00000373668 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms