RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 JAK2O60674 1132 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 TSR1Q2NL82 804 aaKnown RBP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 FAM177A1Q8N128 213 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 LSG1Q9H089 658 aaKnown RBP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 CLIP2Q9UDT6 1046 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 IRS4O14654 1257 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 PRC1O43663 620 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 METAP2P50579 478 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 ZNF445P59923 1031 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 TTLL5Q6EMB2 1281 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 DNAJC25Q9H1X3 360 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 CDC37L1Q7L3B6 337 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 DZIP3Q86Y13 1208 aaKnown RBP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 ZSCAN16Q9H4T2 348 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-206ENST00000368215 ANO10Q9NW15 660 aa9.87□□□□□ -0.83
PTPRK-206ENST00000368215 ANKRD20A12PQ8NF67 263 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 ERBB3P21860 1342 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 SLC3A2P08195 630 aaKnown RBP9.86□□□□□ -0.83
PTPRK-206ENST00000368215 IARSP41252 1262 aaKnown RBP9.86□□□□□ -0.83
PTPRK-206ENST00000368215 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-206ENST00000368215 ZKSCAN5Q9Y2L8 839 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 PPLO60437 1756 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 ZFYP08048 801 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-206ENST00000368215 ATP6V1AP38606 617 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 UVSSAQ2YD98 709 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 KBTBD3Q8NAB2 608 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 SLC26A6Q9BXS9 759 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 TMEM94Q12767 1356 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 FSD2A1L4K1 749 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 CLSTN1O94985 981 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 TTF1Q15361 905 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-206ENST00000368215 CAVIN4Q5BKX8 364 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 PI4K2BQ8TCG2 481 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 C16orf45Q96MC5 204 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-206ENST00000368215 ZNF652Q9Y2D9 606 aa9.86□□□□□ -0.83
PTPRK-206ENST00000368215 MARCKSP29966 332 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-206ENST00000368215 TYRO3Q06418 890 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 OTUD7BQ6GQQ9 843 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 MNS1Q8NEH6 495 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 TPCN1Q9ULQ1 816 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 CRB1P82279 1406 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 CFAP100Q494V2 611 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 CCDC191Q8NCU4 936 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 CCDC112Q8NEF3 446 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 FAM200AQ8TCP9 573 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 XAGE2Q96GT9 111 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 TRMT1Q9NXH9 659 aaKnown RBP9.85□□□□□ -0.83
PTPRK-206ENST00000368215 DBNLQ9UJU6 430 aaKnown RBP9.85□□□□□ -0.83
PTPRK-206ENST00000368215 POLA2Q14181 598 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 LRRC24Q50LG9 513 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 LUZP1Q86V48 1076 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 SASH1O94885 1247 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 ATP5JP18859 108 aa9.85□□□□□ -0.83
PTPRK-206ENST00000368215 NIP7Q9Y221 180 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTPRK-206ENST00000368215 ADAMTS13Q76LX8 1427 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 ITGA6P23229 1130 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
PTPRK-206ENST00000368215 MFSD6Q6ZSS7 791 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 ALG1Q9BT22 464 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 MYOM1P52179 1685 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 USP31Q70CQ4 1352 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 ATP2B2Q01814 1243 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 CCDC186Q7Z3E2 898 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 ZNF589Q86UQ0 364 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-206ENST00000368215 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
PTPRK-206ENST00000368215 PREX1Q8TCU6 1659 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 CTAGE5O15320 804 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 KLHL10Q6JEL2 608 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 WASF1Q92558 559 aa9.84□□□□□ -0.83
PTPRK-206ENST00000368215 LARGE1O95461 756 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 STX1AQ16623 288 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
PTPRK-206ENST00000368215 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 SLAIN2Q9P270 581 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 NPHP4O75161 1426 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-206ENST00000368215 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 DLC1Q96QB1 1528 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 ZBTB43O43298 467 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 ZPR1O75312 459 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 UQCRFS1P1P0C7P4 283 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 EPHA10Q5JZY3 1008 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 PUS3Q9BZE2 481 aaKnown RBP9.83□□□□□ -0.84
PTPRK-206ENST00000368215 TM6SF1Q9BZW5 370 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 ZSWIM6Q9HCJ5 1215 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 CDC42BPGQ6DT37 1551 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 RGS12O14924 1447 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 DDB1Q16531 1140 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 HSP90AA4PQ58FG1 418 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 HELLSQ9NRZ9 838 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 MTMR6Q9Y217 621 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPRK-206ENST00000368215 SLC4A4Q9Y6R1 1079 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-206ENST00000368215 CYP7A1P22680 504 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 ZAP70P43403 619 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms