RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 RUFY2Q8WXA3 655 aa22.44■■□□□ 1.18
CMTM3-201ENST00000361909 KCNB2Q92953 911 aa22.44■■□□□ 1.18
CMTM3-201ENST00000361909 IL25Q9H293 177 aa22.44■■□□□ 1.18
CMTM3-201ENST00000361909 TNMDQ9H2S6 317 aa22.44■■□□□ 1.18
CMTM3-201ENST00000361909 CBX8Q9HC52 389 aa22.44■■□□□ 1.18
CMTM3-201ENST00000361909 PTCD1O75127 700 aaKnown RBP22.43■■□□□ 1.18
CMTM3-201ENST00000361909 PI4K2BQ8TCG2 481 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 BBXQ8WY36 941 aaPredicted RBP22.43■■□□□ 1.18
CMTM3-201ENST00000361909 FAM53CQ9NYF3 392 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 USP21Q9UK80 565 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
CMTM3-201ENST00000361909 UBTFL1P0CB47 393 aaPredicted RBP22.43■■□□□ 1.18
CMTM3-201ENST00000361909 TPD52L1Q16890 204 aaPredicted RBP22.43■■□□□ 1.18
CMTM3-201ENST00000361909 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 LINS1Q8NG48 757 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 TRIM5Q9C035 493 aa22.43■■□□□ 1.18
CMTM3-201ENST00000361909 KIF2AO00139 706 aaPredicted RBP22.42■■□□□ 1.18
CMTM3-201ENST00000361909 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
CMTM3-201ENST00000361909 DOT1LQ8TEK3 1739 aa22.42■■□□□ 1.18
CMTM3-201ENST00000361909 CASTP20810 708 aaKnown RBP22.42■■□□□ 1.18
CMTM3-201ENST00000361909 AIMP1Q12904 312 aaKnown RBP22.42■■□□□ 1.18
CMTM3-201ENST00000361909 CEP135Q66GS9 1140 aa22.42■■□□□ 1.18
CMTM3-201ENST00000361909 SARM1Q6SZW1 724 aa22.42■■□□□ 1.18
CMTM3-201ENST00000361909 CCDC83Q8IWF9 413 aa22.42■■□□□ 1.18
CMTM3-201ENST00000361909 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
CMTM3-201ENST00000361909 GTF2E1P29083 439 aaPredicted RBP22.41■■□□□ 1.18
CMTM3-201ENST00000361909 RBM6P78332 1123 aaKnown RBP22.41■■□□□ 1.18
CMTM3-201ENST00000361909 ANO6Q4KMQ2 910 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 TTC6Q86TZ1 520 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 LUZP1Q86V48 1076 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 CLSTN2Q9H4D0 955 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 ZSWIM6Q9HCJ5 1215 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 KCND1Q9NSA2 647 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 PDRG1Q9NUG6 133 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 CYP46A1Q9Y6A2 500 aa22.41■■□□□ 1.18
CMTM3-201ENST00000361909 RASEFQ8IZ41 740 aa22.4■■□□□ 1.18
CMTM3-201ENST00000361909 ERO1AQ96HE7 468 aa22.4■■□□□ 1.18
CMTM3-201ENST00000361909 TTC41PQ6P2S7 1318 aa22.4■■□□□ 1.18
CMTM3-201ENST00000361909 VPS37CA5D8V6 355 aaPredicted RBP22.4■■□□□ 1.18
CMTM3-201ENST00000361909 SLC20A2Q08357 652 aa22.4■■□□□ 1.18
CMTM3-201ENST00000361909 FAM98CQ17RN3 349 aaKnown RBP22.39■■□□□ 1.18
CMTM3-201ENST00000361909 KIF1BPQ96EK5 621 aa22.39■■□□□ 1.18
CMTM3-201ENST00000361909 TMEM51Q9NW97 253 aa22.39■■□□□ 1.18
CMTM3-201ENST00000361909 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.18
CMTM3-201ENST00000361909 NBPF26B4DH59 902 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 NEXNQ0ZGT2 675 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 LRMPQ12912 555 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 NBPF14Q5TI25 921 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 MEX3CQ5U5Q3 659 aaKnown RBP22.39■■□□□ 1.17
CMTM3-201ENST00000361909 NBPF10Q6P3W6 841 aaKnown RBP22.39■■□□□ 1.17
CMTM3-201ENST00000361909 NBPF15Q8N660 670 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.17
CMTM3-201ENST00000361909 CALCOCO1Q9P1Z2 691 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 CLIP2Q9UDT6 1046 aa22.39■■□□□ 1.17
CMTM3-201ENST00000361909 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 GOLGA6L4A6NEF3 574 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 MRFAP1L1Q96HT8 127 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 LARGE1O95461 756 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 POLA2Q14181 598 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 PLBD2Q8NHP8 589 aa22.38■■□□□ 1.17
CMTM3-201ENST00000361909 UTYO14607 1347 aa22.37■■□□□ 1.17
CMTM3-201ENST00000361909 STARD3NLO95772 234 aa22.37■■□□□ 1.17
CMTM3-201ENST00000361909 NYAP1Q6ZVC0 841 aa22.37■■□□□ 1.17
CMTM3-201ENST00000361909 SYTL4Q96C24 671 aaPredicted RBP22.37■■□□□ 1.17
CMTM3-201ENST00000361909 TIGD1Q96MW7 591 aa22.37■■□□□ 1.17
CMTM3-201ENST00000361909 LIG1P18858 919 aa22.36■■□□□ 1.17
CMTM3-201ENST00000361909 A1BGP04217 495 aa22.36■■□□□ 1.17
CMTM3-201ENST00000361909 NBPF7P0C2Y1 421 aaPredicted RBP22.36■■□□□ 1.17
CMTM3-201ENST00000361909 ZNF165P49910 485 aa22.36■■□□□ 1.17
CMTM3-201ENST00000361909 LARP1BQ659C4 914 aaKnown RBP22.36■■□□□ 1.17
CMTM3-201ENST00000361909 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
CMTM3-201ENST00000361909 CACTINQ8WUQ7 758 aaKnown RBP22.36■■□□□ 1.17
CMTM3-201ENST00000361909 GLRX3O76003 335 aaKnown RBP22.35■■□□□ 1.17
CMTM3-201ENST00000361909 ANKRD1Q15327 319 aa22.35■■□□□ 1.17
CMTM3-201ENST00000361909 JAKMIP1Q96N16 626 aaKnown RBP22.35■■□□□ 1.17
CMTM3-201ENST00000361909 DACT1Q9NYF0 836 aa22.35■■□□□ 1.17
CMTM3-201ENST00000361909 C9orf78Q9NZ63 289 aaPredicted RBP22.35■■□□□ 1.17
CMTM3-201ENST00000361909 THSD7AQ9UPZ6 1657 aa22.35■■□□□ 1.17
CMTM3-201ENST00000361909 IGSF3O75054 1194 aa22.35■■□□□ 1.17
CMTM3-201ENST00000361909 ZKSCAN1P17029 563 aaPredicted RBP22.35■■□□□ 1.17
CMTM3-201ENST00000361909 PTPN14Q15678 1187 aa22.35■■□□□ 1.17
CMTM3-201ENST00000361909 TPRNQ4KMQ1 711 aa22.35■■□□□ 1.17
CMTM3-201ENST00000361909 ARFGEF2Q9Y6D5 1785 aa22.34■■□□□ 1.17
CMTM3-201ENST00000361909 PIP4K2AP48426 406 aaPredicted RBP22.34■■□□□ 1.17
CMTM3-201ENST00000361909 LRRC8AQ8IWT6 810 aa22.34■■□□□ 1.17
CMTM3-201ENST00000361909 TSPYL1Q9H0U9 437 aa22.34■■□□□ 1.17
CMTM3-201ENST00000361909 ALDH8A1Q9H2A2 487 aaPredicted RBP22.34■■□□□ 1.17
CMTM3-201ENST00000361909 IGKV5-2P06315 115 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 CDK11BP21127 795 aaKnown RBP22.33■■□□□ 1.17
CMTM3-201ENST00000361909 PSMA5P28066 241 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 CWF19L2Q2TBE0 894 aaKnown RBP22.33■■□□□ 1.17
CMTM3-201ENST00000361909 KMT5BQ4FZB7 885 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 NUTM1Q86Y26 1132 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 DNAJC10Q8IXB1 793 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 SPATA32Q96LK8 384 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms