RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 LMNB1P20700 586 aa30.31■■■□□ 2.44
ALKAL1-201ENST00000358543 SUPT20HQ8NEM7 779 aa30.31■■■□□ 2.44
ALKAL1-201ENST00000358543 VPS33BQ9H267 617 aa30.31■■■□□ 2.44
ALKAL1-201ENST00000358543 SRGAP3O43295 1099 aa30.3■■■□□ 2.44
ALKAL1-201ENST00000358543 ATP8B2P98198 1209 aa30.3■■■□□ 2.44
ALKAL1-201ENST00000358543 PTPN12Q05209 780 aaKnown RBP30.3■■■□□ 2.44
ALKAL1-201ENST00000358543 ANKRD2Q9GZV1 360 aa30.3■■■□□ 2.44
ALKAL1-201ENST00000358543 C1orf115Q9H7X2 142 aa30.3■■■□□ 2.44
ALKAL1-201ENST00000358543 CHD4Q14839 1912 aa30.3■■■□□ 2.44
ALKAL1-201ENST00000358543 XDHP47989 1333 aa30.29■■■□□ 2.44
ALKAL1-201ENST00000358543 PRELPP51888 382 aa30.29■■■□□ 2.44
ALKAL1-201ENST00000358543 CNNM1Q9NRU3 951 aa30.29■■■□□ 2.44
ALKAL1-201ENST00000358543 ANKIB1Q9P2G1 1089 aa30.29■■■□□ 2.44
ALKAL1-201ENST00000358543 FBXO3Q9UK99 471 aa30.29■■■□□ 2.44
ALKAL1-201ENST00000358543 SBF1O95248 1867 aa30.29■■■□□ 2.44
ALKAL1-201ENST00000358543 COPRSQ9NQ92 184 aa30.28■■■□□ 2.44
ALKAL1-201ENST00000358543 RIPOR2Q9Y4F9 1068 aa30.28■■■□□ 2.44
ALKAL1-201ENST00000358543 SPEF2Q9C093 1822 aa30.28■■■□□ 2.44
ALKAL1-201ENST00000358543 CHRNDQ07001 517 aa30.27■■■□□ 2.44
ALKAL1-201ENST00000358543 KLHDC4Q8TBB5 520 aa30.27■■■□□ 2.44
ALKAL1-201ENST00000358543 ATP2B4P23634 1241 aa30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 LTBP1Q14766 1721 aa30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 C9orf131Q5VYM1 1079 aa30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 TBC1D16Q8TBP0 767 aa30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 PUS3Q9BZE2 481 aaKnown RBP30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 ZNF277Q9NRM2 450 aaPredicted RBP30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 POLLQ9UGP5 575 aa30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 GGA1Q9UJY5 639 aa30.26■■■□□ 2.43
ALKAL1-201ENST00000358543 PNMA6EA0A0J9YXQ4 647 aa30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 EYA2O00167 538 aa30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 IARSP41252 1262 aaKnown RBP30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 POLA2Q14181 598 aa30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 CEP85Q6P2H3 762 aa30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 SSH3Q8TE77 659 aa30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 LEMD3Q9Y2U8 911 aa30.25■■■□□ 2.43
ALKAL1-201ENST00000358543 MROH5Q6ZUA9 1318 aa30.24■■■□□ 2.43
ALKAL1-201ENST00000358543 DUOX1Q9NRD9 1551 aa30.24■■■□□ 2.43
ALKAL1-201ENST00000358543 CIAO1O76071 339 aa30.24■■■□□ 2.43
ALKAL1-201ENST00000358543 LRRC24Q50LG9 513 aa30.24■■■□□ 2.43
ALKAL1-201ENST00000358543 RPAP2Q8IXW5 612 aaPredicted RBP30.24■■■□□ 2.43
ALKAL1-201ENST00000358543 RNF181Q9P0P0 153 aa30.24■■■□□ 2.43
ALKAL1-201ENST00000358543 C6orf229H3BNL8 230 aa30.23■■■□□ 2.43
ALKAL1-201ENST00000358543 EYA3Q99504 573 aa30.23■■■□□ 2.43
ALKAL1-201ENST00000358543 UFL1O94874 794 aa30.22■■■□□ 2.43
ALKAL1-201ENST00000358543 CRBNQ96SW2 442 aa30.22■■■□□ 2.43
ALKAL1-201ENST00000358543 CCDC88AQ3V6T2 1871 aa30.22■■■□□ 2.43
ALKAL1-201ENST00000358543 KIAA2012Q0VF49 1180 aa30.21■■■□□ 2.43
ALKAL1-201ENST00000358543 WASHC4Q2M389 1173 aa30.21■■■□□ 2.43
ALKAL1-201ENST00000358543 ZC3H4Q9UPT8 1303 aaKnown RBP30.21■■■□□ 2.43
ALKAL1-201ENST00000358543 ATG9AQ7Z3C6 839 aa30.2■■■□□ 2.43
ALKAL1-201ENST00000358543 PA2G4Q9UQ80 394 aaKnown RBP30.2■■■□□ 2.43
ALKAL1-201ENST00000358543 DICER1Q9UPY3 1922 aaKnown RBP30.2■■■□□ 2.42
ALKAL1-201ENST00000358543 PPIP5K2O43314 1243 aa30.19■■■□□ 2.42
ALKAL1-201ENST00000358543 IL15P40933 162 aaPredicted RBP30.19■■■□□ 2.42
ALKAL1-201ENST00000358543 LARGE2Q8N3Y3 721 aa30.19■■■□□ 2.42
ALKAL1-201ENST00000358543 ZNF804BA4D1E1 1349 aa30.19■■■□□ 2.42
ALKAL1-201ENST00000358543 TAF5LO75529 589 aa30.18■■■□□ 2.42
ALKAL1-201ENST00000358543 AAMPQ13685 434 aa30.18■■■□□ 2.42
ALKAL1-201ENST00000358543 AOC3Q16853 763 aa30.18■■■□□ 2.42
ALKAL1-201ENST00000358543 HELBQ8NG08 1087 aaPredicted RBP30.18■■■□□ 2.42
ALKAL1-201ENST00000358543 SIL1Q9H173 461 aa30.18■■■□□ 2.42
ALKAL1-201ENST00000358543 METTL24Q5JXM2 366 aa30.17■■■□□ 2.42
ALKAL1-201ENST00000358543 VGLL2Q8N8G2 317 aa30.17■■■□□ 2.42
ALKAL1-201ENST00000358543 JDP2Q8WYK2 163 aa30.17■■■□□ 2.42
ALKAL1-201ENST00000358543 ZC3H12CQ9C0D7 883 aaKnown RBP30.17■■■□□ 2.42
ALKAL1-201ENST00000358543 PDE8BO95263 885 aa30.16■■■□□ 2.42
ALKAL1-201ENST00000358543 WTIPA6NIX2 430 aaPredicted RBP30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 HMMRO75330 724 aa30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 KCNJ4P48050 445 aa30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 UBE4AQ14139 1066 aa30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 SIRT2Q8IXJ6 389 aa30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 NOP58Q9Y2X3 529 aaKnown RBP30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 A0A1B0GUL6 1792 aa30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 MED23Q9ULK4 1368 aa30.15■■■□□ 2.42
ALKAL1-201ENST00000358543 G3BP1Q13283 466 aaKnown RBP eCLIP30.14■■■□□ 2.42
ALKAL1-201ENST00000358543 C15orf52Q6ZUT6 534 aaKnown RBP30.14■■■□□ 2.42
ALKAL1-201ENST00000358543 GPR101Q96P66 508 aaPredicted RBP30.14■■■□□ 2.42
ALKAL1-201ENST00000358543 FZD9O00144 591 aa30.13■■■□□ 2.41
ALKAL1-201ENST00000358543 RIMBP2O15034 1052 aa30.13■■■□□ 2.41
ALKAL1-201ENST00000358543 CENPBP07199 599 aaPredicted RBP30.13■■■□□ 2.41
ALKAL1-201ENST00000358543 NIM1KQ8IY84 436 aa30.13■■■□□ 2.41
ALKAL1-201ENST00000358543 CEP126Q9P2H0 1117 aa30.13■■■□□ 2.41
ALKAL1-201ENST00000358543 COL4A5P29400 1685 aa30.11■■■□□ 2.41
ALKAL1-201ENST00000358543 SURF6O75683 361 aaKnown RBP30.11■■■□□ 2.41
ALKAL1-201ENST00000358543 ZNRF3Q9ULT6 936 aa30.11■■■□□ 2.41
ALKAL1-201ENST00000358543 IRS2Q9Y4H2 1338 aa30.11■■■□□ 2.41
ALKAL1-201ENST00000358543 SNAP23O00161 211 aa30.1■■■□□ 2.41
ALKAL1-201ENST00000358543 FGFR2P21802 821 aa30.09■■■□□ 2.41
ALKAL1-201ENST00000358543 YY1P25490 414 aa30.09■■■□□ 2.41
ALKAL1-201ENST00000358543 PUM3Q15397 648 aaKnown RBP30.09■■■□□ 2.41
ALKAL1-201ENST00000358543 TXNRD3Q86VQ6 643 aa30.08■■■□□ 2.41
ALKAL1-201ENST00000358543 EXOC6Q8TAG9 804 aa30.08■■■□□ 2.41
ALKAL1-201ENST00000358543 PCDHB15Q9Y5E8 787 aa30.08■■■□□ 2.41
ALKAL1-201ENST00000358543 TIAM2Q8IVF5 1701 aa30.08■■■□□ 2.41
ALKAL1-201ENST00000358543 KLRK1P26718 216 aa30.07■■■□□ 2.4
ALKAL1-201ENST00000358543 HSP90AB4PQ58FF6 505 aa30.07■■■□□ 2.4
ALKAL1-201ENST00000358543 LPIN2Q92539 896 aa30.07■■■□□ 2.4
ALKAL1-201ENST00000358543 COA1Q9GZY4 146 aa30.07■■■□□ 2.4
ALKAL1-201ENST00000358543 EIF6P56537 245 aaKnown RBP30.06■■■□□ 2.4
ALKAL1-201ENST00000358543 DOK7Q18PE1 504 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms