RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
SRSF3-201ENST00000339436 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
SRSF3-201ENST00000339436 GNAI2P04899 355 aa16.09■□□□□ 0.17
SRSF3-201ENST00000339436 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
SRSF3-201ENST00000339436 RRP1P56182 461 aaKnown RBP16.09■□□□□ 0.17
SRSF3-201ENST00000339436 TAF7LQ5H9L4 462 aa16.09■□□□□ 0.17
SRSF3-201ENST00000339436 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
SRSF3-201ENST00000339436 PODXL2Q9NZ53 605 aa16.09■□□□□ 0.17
SRSF3-201ENST00000339436 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
SRSF3-201ENST00000339436 SCN9AQ15858 1988 aa16.08■□□□□ 0.17
SRSF3-201ENST00000339436 XDHP47989 1333 aa16.08■□□□□ 0.17
SRSF3-201ENST00000339436 ZBTB7BO15156 539 aaPredicted RBP16.08■□□□□ 0.16
SRSF3-201ENST00000339436 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.16
SRSF3-201ENST00000339436 SUPT20HQ8NEM7 779 aa16.08■□□□□ 0.16
SRSF3-201ENST00000339436 MINPP1Q9UNW1 487 aa16.08■□□□□ 0.16
SRSF3-201ENST00000339436 MTX1Q13505 466 aa16.07■□□□□ 0.16
SRSF3-201ENST00000339436 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
SRSF3-201ENST00000339436 DDX19BQ9UMR2 479 aa16.07■□□□□ 0.16
SRSF3-201ENST00000339436 COG6Q9Y2V7 657 aa16.07■□□□□ 0.16
SRSF3-201ENST00000339436 UFL1O94874 794 aa16.06■□□□□ 0.16
SRSF3-201ENST00000339436 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
SRSF3-201ENST00000339436 TBC1D16Q8TBP0 767 aa16.06■□□□□ 0.16
SRSF3-201ENST00000339436 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
SRSF3-201ENST00000339436 ZNF646O15015 1829 aaPredicted RBP16.06■□□□□ 0.16
SRSF3-201ENST00000339436 PPIP5K2O43314 1243 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 CHRNDQ07001 517 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 AOC3Q16853 763 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 VPS33BQ9H267 617 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 GGA1Q9UJY5 639 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 MYH13Q9UKX3 1938 aa16.05■□□□□ 0.16
SRSF3-201ENST00000339436 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 KLHDC4Q8TBB5 520 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 CNNM1Q9NRU3 951 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 WDR90Q96KV7 1748 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
SRSF3-201ENST00000339436 PTPN12Q05209 780 aaKnown RBP16.04■□□□□ 0.16
SRSF3-201ENST00000339436 PUS3Q9BZE2 481 aaKnown RBP16.04■□□□□ 0.16
SRSF3-201ENST00000339436 MED23Q9ULK4 1368 aa16.03■□□□□ 0.16
SRSF3-201ENST00000339436 GPR101Q96P66 508 aaPredicted RBP16.03■□□□□ 0.16
SRSF3-201ENST00000339436 EYA3Q99504 573 aa16.03■□□□□ 0.16
SRSF3-201ENST00000339436 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
SRSF3-201ENST00000339436 SCN4AP35499 1836 aa16.02■□□□□ 0.16
SRSF3-201ENST00000339436 WASHC4Q2M389 1173 aa16.02■□□□□ 0.15
SRSF3-201ENST00000339436 LRRC24Q50LG9 513 aa16.02■□□□□ 0.15
SRSF3-201ENST00000339436 NIM1KQ8IY84 436 aa16.02■□□□□ 0.15
SRSF3-201ENST00000339436 JDP2Q8WYK2 163 aa16.02■□□□□ 0.15
SRSF3-201ENST00000339436 ZBTB40Q9NUA8 1239 aa16.02■□□□□ 0.15
SRSF3-201ENST00000339436 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.15
SRSF3-201ENST00000339436 PNMA6EA0A0J9YXQ4 647 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 FZD9O00144 591 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 EYA2O00167 538 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 CHMP4BQ9H444 224 aaKnown RBP16.01■□□□□ 0.15
SRSF3-201ENST00000339436 COPRSQ9NQ92 184 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 ZNF804BA4D1E1 1349 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
SRSF3-201ENST00000339436 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
SRSF3-201ENST00000339436 TAF5LO75529 589 aa16■□□□□ 0.15
SRSF3-201ENST00000339436 CIAO1O76071 339 aa16■□□□□ 0.15
SRSF3-201ENST00000339436 CEP85Q6P2H3 762 aa16■□□□□ 0.15
SRSF3-201ENST00000339436 VGLL2Q8N8G2 317 aa16■□□□□ 0.15
SRSF3-201ENST00000339436 ZNF784Q8NCA9 323 aaPredicted RBP16■□□□□ 0.15
SRSF3-201ENST00000339436 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
SRSF3-201ENST00000339436 SIL1Q9H173 461 aa16■□□□□ 0.15
SRSF3-201ENST00000339436 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
SRSF3-201ENST00000339436 RIMBP2O15034 1052 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 KCNJ4P48050 445 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 POLA2Q14181 598 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 ATG9AQ7Z3C6 839 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
SRSF3-201ENST00000339436 IRS2Q9Y4H2 1338 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 KLRK1P26718 216 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 SSH3Q8TE77 659 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 ZNRF3Q9ULT6 936 aa15.99■□□□□ 0.15
SRSF3-201ENST00000339436 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
SRSF3-201ENST00000339436 GLTPD2A6NH11 291 aa15.98■□□□□ 0.15
SRSF3-201ENST00000339436 SNAP23O00161 211 aa15.98■□□□□ 0.15
SRSF3-201ENST00000339436 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
SRSF3-201ENST00000339436 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
SRSF3-201ENST00000339436 DBNDD1Q9H9R9 158 aa15.98■□□□□ 0.15
SRSF3-201ENST00000339436 YDJCA8MPS7 323 aa15.97■□□□□ 0.15
SRSF3-201ENST00000339436 ECE2O60344 883 aa15.97■□□□□ 0.15
SRSF3-201ENST00000339436 PDE8BO95263 885 aa15.97■□□□□ 0.15
SRSF3-201ENST00000339436 IL15P40933 162 aaPredicted RBP15.97■□□□□ 0.15
SRSF3-201ENST00000339436 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
SRSF3-201ENST00000339436 C15orf52Q6ZUT6 534 aaKnown RBP15.97■□□□□ 0.15
SRSF3-201ENST00000339436 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
SRSF3-201ENST00000339436 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
SRSF3-201ENST00000339436 DOK7Q18PE1 504 aa15.96■□□□□ 0.15
SRSF3-201ENST00000339436 PUM3Q15397 648 aaKnown RBP15.95■□□□□ 0.14
SRSF3-201ENST00000339436 DPY19L2Q6NUT2 758 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms