RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PAXBP1Q9Y5B6 917 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
PTCH1-201ENST00000331920 DNAI1Q9UI46 699 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 KRT9P35527 623 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 NEDD9Q14511 834 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 USP37Q86T82 979 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 RNF34Q969K3 372 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTCH1-201ENST00000331920 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 STX8Q9UNK0 236 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 SSFA2P28290 1259 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 SEPT8Q92599 483 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 GPTP24298 496 aa18.58■□□□□ 0.57
PTCH1-201ENST00000331920 PPP2R1AP30153 589 aa18.58■□□□□ 0.57
PTCH1-201ENST00000331920 PDE4BQ07343 736 aa18.58■□□□□ 0.57
PTCH1-201ENST00000331920 SF3A3Q12874 501 aaKnown RBP eCLIP18.58■□□□□ 0.57
PTCH1-201ENST00000331920 ARHGEF2Q92974 986 aaKnown RBP18.58■□□□□ 0.57
PTCH1-201ENST00000331920 HLA-DOAP06340 250 aa18.58■□□□□ 0.57
PTCH1-201ENST00000331920 PDE3AQ14432 1141 aa18.58■□□□□ 0.57
PTCH1-201ENST00000331920 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.57
PTCH1-201ENST00000331920 PRPHP41219 470 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.56
PTCH1-201ENST00000331920 USP16Q9Y5T5 823 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 PPP1R12AO14974 1030 aaPredicted RBP18.58■□□□□ 0.56
PTCH1-201ENST00000331920 ZNF131P52739 623 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 FRMD4BQ9Y2L6 1034 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 F8W031 263 aaPredicted RBP18.58■□□□□ 0.56
PTCH1-201ENST00000331920 KRT5P13647 590 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 SP4Q02446 784 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 KANK3Q6NY19 840 aa18.58■□□□□ 0.56
PTCH1-201ENST00000331920 GOLIM4O00461 696 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 GLRX3O76003 335 aaKnown RBP18.57■□□□□ 0.56
PTCH1-201ENST00000331920 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
PTCH1-201ENST00000331920 PPFIBP2Q8ND30 876 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 RHOXF2BP0C7M4 288 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 MFSD6Q6ZSS7 791 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 RHOXF2Q9BQY4 288 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 GIPC1O14908 333 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 ZNF165P49910 485 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 PDCD7Q8N8D1 485 aaKnown RBP18.57■□□□□ 0.56
PTCH1-201ENST00000331920 TRIM6Q9C030 488 aaPredicted RBP18.57■□□□□ 0.56
PTCH1-201ENST00000331920 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
PTCH1-201ENST00000331920 HPDP32754 393 aaPredicted RBP18.57■□□□□ 0.56
PTCH1-201ENST00000331920 ERMNQ8TAM6 284 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 EBAG9O00559 213 aa18.57■□□□□ 0.56
PTCH1-201ENST00000331920 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 GIMAP6Q6P9H5 292 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 LCA5Q86VQ0 697 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 INF2Q27J81 1249 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 CCDC102BQ68D86 513 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 BUB1BO60566 1050 aaPredicted RBP18.56■□□□□ 0.56
PTCH1-201ENST00000331920 SYKP43405 635 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 RMND1Q9NWS8 449 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
PTCH1-201ENST00000331920 LRRC27Q9C0I9 530 aa18.55■□□□□ 0.56
PTCH1-201ENST00000331920 CCDC7Q96M83 1385 aa18.55■□□□□ 0.56
PTCH1-201ENST00000331920 WDR46O15213 610 aaKnown RBP18.55■□□□□ 0.56
PTCH1-201ENST00000331920 ERCC6LQ2NKX8 1250 aa18.55■□□□□ 0.56
PTCH1-201ENST00000331920 CACNA2D3Q8IZS8 1091 aa18.55■□□□□ 0.56
PTCH1-201ENST00000331920 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
PTCH1-201ENST00000331920 GBP1P32455 592 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 SUDS3Q9H7L9 328 aaPredicted RBP18.54■□□□□ 0.56
PTCH1-201ENST00000331920 NBPF1Q3BBV0 1214 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 BIN2Q9UBW5 565 aaPredicted RBP18.54■□□□□ 0.56
PTCH1-201ENST00000331920 NOP9Q86U38 636 aaKnown RBP18.54■□□□□ 0.56
PTCH1-201ENST00000331920 DDX19AQ9NUU7 478 aaKnown RBP18.54■□□□□ 0.56
PTCH1-201ENST00000331920 MGEA5O60502 916 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 MCM7P33993 719 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 GUCA1BQ9UMX6 200 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 TTLL3Q9Y4R7 772 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 ITIH3Q06033 890 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 KARSQ15046 597 aaKnown RBP18.54■□□□□ 0.56
PTCH1-201ENST00000331920 CABP1Q9NZU7 370 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 DAPK3O43293 454 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 LIMCH1Q9UPQ0 1083 aa18.54■□□□□ 0.56
PTCH1-201ENST00000331920 BRD4O60885 1362 aaPredicted RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 BAG3O95817 575 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 PICALMQ13492 652 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 ANO6Q4KMQ2 910 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 CCDC122Q5T0U0 273 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 ADAMTS2O95450 1211 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 CLUL1Q15846 466 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 GOLGA1Q92805 767 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 DCAF17Q5H9S7 520 aaPredicted RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 IFIT1BQ5T764 474 aaKnown RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 CXorf38Q8TB03 319 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 MORC4Q8TE76 937 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 ASIC1P78348 528 aa18.53■□□□□ 0.56
PTCH1-201ENST00000331920 BAG1Q99933 345 aaPredicted RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 PYM1Q9BRP8 204 aaKnown RBP18.53■□□□□ 0.56
PTCH1-201ENST00000331920 MCM10Q7L590 875 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 MAP7Q14244 749 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 KMT5BQ4FZB7 885 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 CTAGE1Q96RT6 745 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms