RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 THEMISQ8N1K5 641 aaPredicted RBP32.34■■■□□ 2.77
CBX4-201ENST00000269397 CCDC112Q8NEF3 446 aa32.34■■■□□ 2.77
CBX4-201ENST00000269397 CFAP45Q9UL16 551 aa32.34■■■□□ 2.77
CBX4-201ENST00000269397 ARHGAP23Q9P227 1491 aa32.33■■■□□ 2.77
CBX4-201ENST00000269397 SLIT1O75093 1534 aa32.33■■■□□ 2.77
CBX4-201ENST00000269397 GCKRQ14397 625 aa32.33■■■□□ 2.77
CBX4-201ENST00000269397 XAGE3Q8WTP9 111 aa32.33■■■□□ 2.77
CBX4-201ENST00000269397 ZNF609O15014 1411 aa32.33■■■□□ 2.77
CBX4-201ENST00000269397 USP16Q9Y5T5 823 aa32.33■■■□□ 2.77
CBX4-201ENST00000269397 NEXNQ0ZGT2 675 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 STOX1Q6ZVD7 989 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 LRRC8AQ8IWT6 810 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 NAP1L2Q9ULW6 460 aaPredicted RBP32.32■■■□□ 2.76
CBX4-201ENST00000269397 ADD1P35611 737 aaKnown RBP32.32■■■□□ 2.76
CBX4-201ENST00000269397 CCT2P78371 535 aaKnown RBP32.32■■■□□ 2.76
CBX4-201ENST00000269397 TNNI3KQ59H18 835 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 COPS6Q7L5N1 327 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 FILIP1Q7Z7B0 1213 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 DBNDD2Q9BQY9 259 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 FPGT-TNNI3KV9GXZ4 949 aa32.32■■■□□ 2.76
CBX4-201ENST00000269397 GUCY1B3Q02153 619 aa32.31■■■□□ 2.76
CBX4-201ENST00000269397 ATP5JP18859 108 aa32.31■■■□□ 2.76
CBX4-201ENST00000269397 ZSCAN16Q9H4T2 348 aaPredicted RBP32.31■■■□□ 2.76
CBX4-201ENST00000269397 ANKRD24Q8TF21 1146 aa32.3■■■□□ 2.76
CBX4-201ENST00000269397 USP54Q70EL1 1684 aa32.3■■■□□ 2.76
CBX4-201ENST00000269397 CEP135Q66GS9 1140 aa32.3■■■□□ 2.76
CBX4-201ENST00000269397 KCNH5Q8NCM2 988 aa32.3■■■□□ 2.76
CBX4-201ENST00000269397 APOBRQ0VD83 1088 aa32.29■■■□□ 2.76
CBX4-201ENST00000269397 NCOA5Q9HCD5 579 aaKnown RBP32.29■■■□□ 2.76
CBX4-201ENST00000269397 USP28Q96RU2 1077 aa32.29■■■□□ 2.76
CBX4-201ENST00000269397 GTPBP4Q9BZE4 634 aaKnown RBP32.29■■■□□ 2.76
CBX4-201ENST00000269397 BECN2A8MW95 431 aa32.28■■■□□ 2.76
CBX4-201ENST00000269397 TRMT1Q9NXH9 659 aaKnown RBP32.28■■■□□ 2.76
CBX4-201ENST00000269397 U3KPZ7 1027 aaPredicted RBP32.28■■■□□ 2.76
CBX4-201ENST00000269397 A0A0G2JLW4 131 aa32.28■■■□□ 2.76
CBX4-201ENST00000269397 NOL12Q9UGY1 213 aaKnown RBP eCLIP32.28■■■□□ 2.76
CBX4-201ENST00000269397 PAXBP1Q9Y5B6 917 aa32.28■■■□□ 2.76
CBX4-201ENST00000269397 V9GYY5 206 aaPredicted RBP32.28■■■□□ 2.76
CBX4-201ENST00000269397 PTPN12Q05209 780 aaKnown RBP32.27■■■□□ 2.76
CBX4-201ENST00000269397 NSUN7Q8NE18 718 aaKnown RBP32.27■■■□□ 2.76
CBX4-201ENST00000269397 CTDNEP1O95476 244 aa32.27■■■□□ 2.76
CBX4-201ENST00000269397 GCP02774 474 aa32.27■■■□□ 2.76
CBX4-201ENST00000269397 MCMDC2Q4G0Z9 681 aa32.27■■■□□ 2.76
CBX4-201ENST00000269397 SKILP12757 684 aa32.26■■■□□ 2.76
CBX4-201ENST00000269397 STX1AQ16623 288 aa32.26■■■□□ 2.76
CBX4-201ENST00000269397 UBE3BQ7Z3V4 1068 aa32.26■■■□□ 2.76
CBX4-201ENST00000269397 SNW1Q13573 536 aaKnown RBP32.26■■■□□ 2.75
CBX4-201ENST00000269397 CTNNA3Q9UI47 895 aa32.26■■■□□ 2.75
CBX4-201ENST00000269397 AXIN2Q9Y2T1 843 aa32.26■■■□□ 2.75
CBX4-201ENST00000269397 PTPDC1A2A3K4 754 aa32.25■■■□□ 2.75
CBX4-201ENST00000269397 CDC25BP30305 580 aa32.25■■■□□ 2.75
CBX4-201ENST00000269397 CHST3Q7LGC8 479 aa32.25■■■□□ 2.75
CBX4-201ENST00000269397 SMARCC2Q8TAQ2 1214 aa32.25■■■□□ 2.75
CBX4-201ENST00000269397 ATP5J2-PTCD1G3V325 749 aa32.24■■■□□ 2.75
CBX4-201ENST00000269397 PTCD1O75127 700 aaKnown RBP32.24■■■□□ 2.75
CBX4-201ENST00000269397 RFX5P48382 616 aaPredicted RBP32.24■■■□□ 2.75
CBX4-201ENST00000269397 ZNF790Q6PG37 636 aa32.24■■■□□ 2.75
CBX4-201ENST00000269397 CCDC73Q6ZRK6 1079 aa32.24■■■□□ 2.75
CBX4-201ENST00000269397 COPRSQ9NQ92 184 aa32.24■■■□□ 2.75
CBX4-201ENST00000269397 RCOR1Q9UKL0 485 aa32.24■■■□□ 2.75
CBX4-201ENST00000269397 KIF13AQ9H1H9 1805 aa32.24■■■□□ 2.75
CBX4-201ENST00000269397 DHX40Q8IX18 779 aaKnown RBP32.23■■■□□ 2.75
CBX4-201ENST00000269397 METTL22Q9BUU2 404 aaPredicted RBP32.23■■■□□ 2.75
CBX4-201ENST00000269397 PFKFB2O60825 505 aa32.23■■■□□ 2.75
CBX4-201ENST00000269397 ME1P48163 572 aa32.23■■■□□ 2.75
CBX4-201ENST00000269397 SARM1Q6SZW1 724 aa32.23■■■□□ 2.75
CBX4-201ENST00000269397 MRFAP1L1Q96HT8 127 aa32.23■■■□□ 2.75
CBX4-201ENST00000269397 CCDC69A6NI79 296 aa32.23■■■□□ 2.75
CBX4-201ENST00000269397 KINO60870 393 aaKnown RBP32.23■■■□□ 2.75
CBX4-201ENST00000269397 CAVIN2O95810 425 aa32.23■■■□□ 2.75
CBX4-201ENST00000269397 ARHGEF25Q86VW2 580 aa32.22■■■□□ 2.75
CBX4-201ENST00000269397 FEZ1Q99689 392 aa32.22■■■□□ 2.75
CBX4-201ENST00000269397 NCAPD2Q15021 1401 aa32.22■■■□□ 2.75
CBX4-201ENST00000269397 AOPEPQ8N6M6 819 aa32.21■■■□□ 2.75
CBX4-201ENST00000269397 FSIP1Q8NA03 581 aa32.21■■■□□ 2.75
CBX4-201ENST00000269397 OGFRQ9NZT2 677 aa32.21■■■□□ 2.75
CBX4-201ENST00000269397 PTPN14Q15678 1187 aa32.21■■■□□ 2.75
CBX4-201ENST00000269397 NFATC2IPQ8NCF5 419 aa32.21■■■□□ 2.75
CBX4-201ENST00000269397 ANKRD13DQ6ZTN6 518 aa32.2■■■□□ 2.75
CBX4-201ENST00000269397 DHX32Q7L7V1 743 aaKnown RBP32.2■■■□□ 2.75
CBX4-201ENST00000269397 HAUS7Q99871 368 aa32.2■■■□□ 2.75
CBX4-201ENST00000269397 ZNF215Q9UL58 517 aaPredicted RBP32.2■■■□□ 2.75
CBX4-201ENST00000269397 SYCP1Q15431 976 aa32.19■■■□□ 2.74
CBX4-201ENST00000269397 GOLIM4O00461 696 aa32.19■■■□□ 2.74
CBX4-201ENST00000269397 CTAGE5O15320 804 aa32.19■■■□□ 2.74
CBX4-201ENST00000269397 NAA16Q6N069 864 aaPredicted RBP32.19■■■□□ 2.74
CBX4-201ENST00000269397 RBM6P78332 1123 aaKnown RBP32.18■■■□□ 2.74
CBX4-201ENST00000269397 CCZ1BP86790 482 aa32.18■■■□□ 2.74
CBX4-201ENST00000269397 CCZ1P86791 482 aaPredicted RBP32.18■■■□□ 2.74
CBX4-201ENST00000269397 ENGASEQ8NFI3 743 aa32.18■■■□□ 2.74
CBX4-201ENST00000269397 NEUROD6Q96NK8 337 aa32.18■■■□□ 2.74
CBX4-201ENST00000269397 CGNQ9P2M7 1197 aaKnown RBP32.18■■■□□ 2.74
CBX4-201ENST00000269397 MRC1P22897 1456 aa32.18■■■□□ 2.74
CBX4-201ENST00000269397 ILDR1Q86SU0 546 aaPredicted RBP32.18■■■□□ 2.74
CBX4-201ENST00000269397 LLPHQ9BRT6 129 aaKnown RBP32.18■■■□□ 2.74
CBX4-201ENST00000269397 FAM160A1Q05DH4 1040 aa32.17■■■□□ 2.74
CBX4-201ENST00000269397 ZNF496Q96IT1 587 aaPredicted RBP32.17■■■□□ 2.74
CBX4-201ENST00000269397 ORAI2Q96SN7 254 aa32.17■■■□□ 2.74
CBX4-201ENST00000269397 ANO10Q9NW15 660 aa32.16■■■□□ 2.74
CBX4-201ENST00000269397 OTUD7BQ6GQQ9 843 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms