RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 PARP3Q9Y6F1 533 aa11.26□□□□□ -0.61
IRF1-201ENST00000245414 ZSCAN12O43309 604 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 OTUD6BQ8N6M0 293 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
IRF1-201ENST00000245414 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 MYO1FO00160 1098 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 CHUKO15111 745 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 PSMD2Q13200 908 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
IRF1-201ENST00000245414 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
IRF1-201ENST00000245414 GPTP24298 496 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 GBP2P32456 591 aaPredicted RBP11.25□□□□□ -0.61
IRF1-201ENST00000245414 ACTN3Q08043 901 aaPredicted RBP11.25□□□□□ -0.61
IRF1-201ENST00000245414 IQCB1Q15051 598 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
IRF1-201ENST00000245414 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.25□□□□□ -0.61
IRF1-201ENST00000245414 RNF40O75150 1001 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 HMMRO75330 724 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 CHMP4BP1P59074 171 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 GNAI1P63096 354 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 ARMCX5Q6P1M9 558 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
IRF1-201ENST00000245414 XPO4Q9C0E2 1151 aaKnown RBP11.24□□□□□ -0.61
IRF1-201ENST00000245414 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 ABCB6Q9NP58 842 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 IMPACTQ9P2X3 320 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
IRF1-201ENST00000245414 CCDC73Q6ZRK6 1079 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 ITFG2Q969R8 447 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 MPHOSPH8Q99549 860 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
IRF1-201ENST00000245414 CFAP65Q6ZU64 1925 aaKnown RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 MAP2K7O14733 419 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 C21orf2O43822 256 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 AP1G2O75843 785 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 CCNHP51946 323 aaPredicted RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 BCAS4Q8TDM0 211 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 ABCC1P33527 1531 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 IFIT2P09913 472 aaKnown RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 CHMLP26374 656 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 CASP8Q14790 479 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 RBBP5Q15291 538 aaKnown RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 C11orf91Q3C1V1 193 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 RNF187Q5TA31 235 aaPredicted RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 RUFY3Q7L099 469 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 CEP112Q8N8E3 955 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 SSBP05455 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
IRF1-201ENST00000245414 PDILTQ8N807 584 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 ANKRD44Q8N8A2 993 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 THOC1Q96FV9 657 aaKnown RBP11.23□□□□□ -0.61
IRF1-201ENST00000245414 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 LRRCC1Q9C099 1032 aa11.23□□□□□ -0.61
IRF1-201ENST00000245414 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 SGSM2O43147 1006 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 RPSAP08865 295 aaKnown RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 CEP85LQ5SZL2 805 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 LEO1Q8WVC0 666 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 DHX58Q96C10 678 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 ADGRF5Q8IZF2 1346 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 LARGE1O95461 756 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 MAP4K4O95819 1239 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 CRYMQ14894 314 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 SCLT1Q96NL6 688 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 BSDC1Q9NW68 430 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 SYNMO15061 1565 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 PDCP20941 246 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 BEND6Q5SZJ8 279 aaPredicted RBP11.22□□□□□ -0.61
IRF1-201ENST00000245414 ARMC3Q5W041 872 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 MCM8Q9UJA3 840 aa11.22□□□□□ -0.61
IRF1-201ENST00000245414 TRAPPC8Q9Y2L5 1435 aa11.21□□□□□ -0.61
IRF1-201ENST00000245414 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
IRF1-201ENST00000245414 HMOX1P09601 288 aa11.21□□□□□ -0.61
IRF1-201ENST00000245414 KARSQ15046 597 aaKnown RBP11.21□□□□□ -0.61
IRF1-201ENST00000245414 ARHGAP45Q92619 1136 aa11.21□□□□□ -0.61
IRF1-201ENST00000245414 WDR24Q96S15 920 aa11.21□□□□□ -0.61
IRF1-201ENST00000245414 KCND1Q9NSA2 647 aa11.21□□□□□ -0.61
IRF1-201ENST00000245414 TBC1D8BQ0IIM8 1120 aa11.21□□□□□ -0.62
IRF1-201ENST00000245414 EIF2AK4Q9P2K8 1649 aaKnown RBP11.21□□□□□ -0.62
IRF1-201ENST00000245414 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.62
IRF1-201ENST00000245414 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.62
IRF1-201ENST00000245414 E2F5Q15329 346 aa11.21□□□□□ -0.62
IRF1-201ENST00000245414 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms