RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 SPC25Q9HBM1 224 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 RSPH14Q9UHP6 348 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 ITIH3Q06033 890 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 NSMCE1Q8WV22 266 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 ZBTB21Q9ULJ3 1066 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
SLF2-201ENST00000238961 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
SLF2-201ENST00000238961 SYCE3A1L190 88 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 CPLX4Q7Z7G2 160 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 SUFUQ9UMX1 484 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 GOLIM4O00461 696 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 INTS8Q75QN2 995 aaKnown RBP11.64□□□□□ -0.55
SLF2-201ENST00000238961 MRRFQ96E11 262 aaKnown RBP11.64□□□□□ -0.55
SLF2-201ENST00000238961 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 CALM1P0DP23 149 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 CALM2P0DP24 149 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 CALM3P0DP25 149 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 HVCN1Q96D96 273 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 NOB1Q9ULX3 412 aaKnown RBP11.63□□□□□ -0.55
SLF2-201ENST00000238961 DHX57Q6P158 1386 aaKnown RBP11.63□□□□□ -0.55
SLF2-201ENST00000238961 TLDC2A0PJX2 215 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 JAKMIP2Q96AA8 810 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 HDAC9Q9UKV0 1011 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 PTCD1O75127 700 aaKnown RBP11.63□□□□□ -0.55
SLF2-201ENST00000238961 BAG3O95817 575 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 SP4Q02446 784 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 ACBD5Q5T8D3 534 aaPredicted RBP11.63□□□□□ -0.55
SLF2-201ENST00000238961 PPP1R12CQ9BZL4 782 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 HAUS2Q9NVX0 235 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 TXNDC9O14530 226 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 C4orf50Q6ZRC1 276 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 CXorf38Q8TB03 319 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 IFT74Q96LB3 600 aa11.63□□□□□ -0.55
SLF2-201ENST00000238961 C16orf45Q96MC5 204 aaPredicted RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 TTLL3Q9Y4R7 772 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 LACTBP83111 547 aaPredicted RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 RBBP5Q15291 538 aaKnown RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 CACNA2D3Q8IZS8 1091 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 PDE4BQ07343 736 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 PHLDB2Q86SQ0 1253 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 TMOD3Q9NYL9 352 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 PDE6AP16499 860 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 TSTA3Q13630 321 aaPredicted RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 XAB2Q9HCS7 855 aaKnown RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 HMGB1P09429 215 aaKnown RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 ZMAT2Q96NC0 199 aaKnown RBP11.62□□□□□ -0.55
SLF2-201ENST00000238961 VCXQ9H320 206 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 WWC3Q9ULE0 1092 aa11.62□□□□□ -0.55
SLF2-201ENST00000238961 HNRNPCL2B2RXH8 293 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 CETN3O15182 167 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 KRT9P35527 623 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 AAMPQ13685 434 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 SAMD15Q9P1V8 674 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 CFTRP13569 1480 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 A0A1B0GUL7 405 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 STK10O94804 968 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 PRKAR2BP31323 418 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 PPFIA1Q13136 1202 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 N4BP3O15049 544 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 SYF2O95926 243 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 PTGS1P23219 599 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 PALM3A6NDB9 673 aaPredicted RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 ADAMTS2O95450 1211 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 ATP11AP98196 1134 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 RUFY3Q7L099 469 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 SPECC1L-ADORA2AF8WAN1 911 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 HARSP12081 509 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 PCK1P35558 622 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 SNW1Q13573 536 aaKnown RBP11.61□□□□□ -0.55
SLF2-201ENST00000238961 PARD3BQ8TEW8 1205 aa11.61□□□□□ -0.55
SLF2-201ENST00000238961 KRT5P13647 590 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 FBXW4P57775 412 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 GNG11P61952 73 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
SLF2-201ENST00000238961 OGFOD1Q8N543 542 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 PYM1Q9BRP8 204 aaKnown RBP11.6□□□□□ -0.55
SLF2-201ENST00000238961 SPDYE2BA6NHP3 402 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 SPDYE6P0CI01 402 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 MAN1A1P33908 653 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 FSIP1Q8NA03 581 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 RNF8O76064 485 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 LDHCP07864 332 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms