RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 KIF2AO00139 706 aaPredicted RBP20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 NPHP1O15259 732 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 SRGAP3O43295 1099 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 KDM3BQ7LBC6 1761 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 TTC41PQ6P2S7 1318 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 COL9A3Q14050 684 aaPredicted RBP20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 FILIP1Q7Z7B0 1213 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 RBM8AQ9Y5S9 174 aaKnown RBP20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 FHOD1Q9Y613 1164 aa20.75■□□□□ 0.91
CDKN1B-201ENST00000228872 GTF3C6Q969F1 213 aa20.74■□□□□ 0.91
CDKN1B-201ENST00000228872 L2HGDHQ9H9P8 463 aa20.74■□□□□ 0.91
CDKN1B-201ENST00000228872 N4BP2Q86UW6 1770 aaPredicted RBP20.74■□□□□ 0.91
CDKN1B-201ENST00000228872 SIPA1L3O60292 1781 aaPredicted RBP20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 TAF7Q15545 349 aaPredicted RBP20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 NLRP2Q9NX02 1062 aa20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 HNRNPH2P55795 449 aaKnown RBP20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 STX1AQ16623 288 aa20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 ERCC6LQ2NKX8 1250 aa20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 ZNF530Q6P9A1 599 aaPredicted RBP20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 PRDM11Q9NQV5 511 aa20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
CDKN1B-201ENST00000228872 COL5A2P05997 1499 aaPredicted RBP20.72■□□□□ 0.91
CDKN1B-201ENST00000228872 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
CDKN1B-201ENST00000228872 PSMA5P28066 241 aa20.72■□□□□ 0.91
CDKN1B-201ENST00000228872 PHLPP1O60346 1717 aa20.72■□□□□ 0.91
CDKN1B-201ENST00000228872 CSB-PGBD3P0DP91 1061 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 CLCN6P51797 869 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 MEGF6O75095 1541 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 ADCY9O60503 1353 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 SCN11AQ9UI33 1791 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 SNW1Q13573 536 aaKnown RBP20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 RAPGEF4Q8WZA2 1011 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 SLC27A2O14975 620 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 RESTQ13127 1097 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 LRRN4CLQ8ND94 238 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 TCEANC2Q96MN5 208 aa20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDKN1B-201ENST00000228872 BECN2A8MW95 431 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 PNMA6AP0CW24 399 aaPredicted RBP20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 PLA2G4AP47712 749 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 C1orf141Q5JVX7 400 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 DHX40Q8IX18 779 aaKnown RBP20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 COL16A1Q07092 1604 aaPredicted RBP20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 WDR17Q8IZU2 1322 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 MAP4K1Q92918 833 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 TSPYL1Q9H0U9 437 aa20.7■□□□□ 0.9
CDKN1B-201ENST00000228872 TATP17735 454 aaPredicted RBP20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 GSDMDP57764 484 aa20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 BLOC1S2Q6QNY1 142 aa20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 COL14A1Q05707 1796 aaKnown RBP20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 TOB2Q14106 344 aaPredicted RBP20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 TRERF1Q96PN7 1200 aa20.69■□□□□ 0.9
CDKN1B-201ENST00000228872 CTAGE5O15320 804 aa20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 RPS6KB1P23443 525 aa20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 E4F1Q66K89 784 aaPredicted RBP20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 ECHDC1Q9NTX5 307 aa20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 NBPF7P0C2Y1 421 aaPredicted RBP20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 STK3Q13188 491 aa20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 ALDH8A1Q9H2A2 487 aaPredicted RBP20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 LGR6Q9HBX8 967 aa20.68■□□□□ 0.9
CDKN1B-201ENST00000228872 OS9Q13438 667 aaPredicted RBP20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 PPP1R13BQ96KQ4 1090 aa20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 OSBPL5Q9H0X9 879 aaPredicted RBP20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 RNMTO43148 476 aaKnown RBP20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 SYT10Q6XYQ8 523 aa20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 EVI5LQ96CN4 794 aa20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 FAM227BQ96M60 508 aa20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.67■□□□□ 0.9
CDKN1B-201ENST00000228872 ARHGAP29Q52LW3 1261 aa20.66■□□□□ 0.9
CDKN1B-201ENST00000228872 CLASRPQ8N2M8 674 aaKnown RBP20.66■□□□□ 0.9
CDKN1B-201ENST00000228872 JAK2O60674 1132 aa20.66■□□□□ 0.9
CDKN1B-201ENST00000228872 ZRANB2O95218 330 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDKN1B-201ENST00000228872 PLCD3Q8N3E9 789 aa20.66■□□□□ 0.9
CDKN1B-201ENST00000228872 FEZ2Q9UHY8 353 aaPredicted RBP20.66■□□□□ 0.9
CDKN1B-201ENST00000228872 A0A087WWV3 80 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 NMIQ13287 307 aaPredicted RBP20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 NBPF11Q86T75 865 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 BRF1Q92994 677 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 ANO10Q9NW15 660 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 TAF6LQ9Y6J9 622 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 RAD51AP2Q09MP3 1159 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 TRIM34Q9BYJ4 488 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 CFAP45Q9UL16 551 aa20.65■□□□□ 0.9
CDKN1B-201ENST00000228872 MPRIPQ6WCQ1 1025 aa20.64■□□□□ 0.9
CDKN1B-201ENST00000228872 CCAR1Q8IX12 1150 aaKnown RBP20.64■□□□□ 0.9
CDKN1B-201ENST00000228872 AOPEPQ8N6M6 819 aa20.64■□□□□ 0.9
CDKN1B-201ENST00000228872 DDX11Q96FC9 970 aa20.64■□□□□ 0.9
CDKN1B-201ENST00000228872 GOLPH3LQ9H4A5 285 aa20.64■□□□□ 0.9
CDKN1B-201ENST00000228872 IMPACTQ9P2X3 320 aa20.64■□□□□ 0.9
CDKN1B-201ENST00000228872 SYTL4Q96C24 671 aaPredicted RBP20.64■□□□□ 0.89
CDKN1B-201ENST00000228872 GPATCH3Q96I76 525 aa20.64■□□□□ 0.89
CDKN1B-201ENST00000228872 PSDA5PKW4 1024 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms