RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SP4Q02446 784 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 SLC9C2Q5TAH2 1124 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 PKD2L1Q9P0L9 805 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 PIK3R4Q99570 1358 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 HOOK3Q86VS8 718 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 RAB34Q9BZG1 259 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 GSDMDP57764 484 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 INCENPQ9NQS7 918 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 KIF2AO00139 706 aaPredicted RBP15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 F13A1P00488 732 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 TFCP2Q12800 502 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 MRVI1Q9Y6F6 885 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 RIMBP2O15034 1052 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 CETN2P41208 172 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 GCOM1H8Y6P7 765 aaPredicted RBP15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 MYZAPP0CAP1 466 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 KRT13P13646 458 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 SMC1AQ14683 1233 aaKnown RBP15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 KIF14Q15058 1648 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 PDE4BQ07343 736 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 RTN1Q16799 776 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 MAGEB6Q8N7X4 407 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 CCDC150Q8NCX0 1101 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
TGFBR3-201ENST00000212355 AKR1B10O60218 316 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 ABCC11Q96J66 1382 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 CCDC175P0C221 793 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 LONRF3Q496Y0 759 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 RBM26Q5T8P6 1007 aaKnown RBP15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 SYT10Q6XYQ8 523 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 FGFR1OPO95684 399 aaKnown RBP15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 RFC4P35249 363 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 SAP30BPQ9UHR5 308 aaKnown RBP15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 GUCA1BQ9UMX6 200 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 HSF2BPO75031 334 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 FAM160A1Q05DH4 1040 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 ZNF354CQ86Y25 554 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 CEP63Q96MT8 703 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 RTL1A6NKG5 1358 aa15.55■□□□□ 0.08
TGFBR3-201ENST00000212355 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 FAM173BQ6P4H8 233 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 IFNL2Q8IZJ0 200 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 IFNKQ9P0W0 207 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 MAPK8IP1Q9UQF2 711 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 NBPF6Q5VWK0 638 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 APBB1IPQ7Z5R6 666 aaPredicted RBP15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 NBPF4Q96M43 638 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 CCT6AP40227 531 aaKnown RBP15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 ASIC1P78348 528 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 IFT81Q8WYA0 676 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 PLEKHA4Q9H4M7 779 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 MCMDC2Q4G0Z9 681 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 NFATC2IPQ8NCF5 419 aa15.54■□□□□ 0.08
TGFBR3-201ENST00000212355 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 TYRO3Q06418 890 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 SELENOSQ9BQE4 189 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 TTF1Q15361 905 aaPredicted RBP15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 HOMER2Q9NSB8 354 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 VPS18Q9P253 973 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 KIF5BP33176 963 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 PHACTR3Q96KR7 559 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
TGFBR3-201ENST00000212355 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 NAPAP54920 295 aa15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 AMPD3Q01432 767 aa15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 MRRFQ96E11 262 aaKnown RBP15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 BICC1Q9H694 974 aaKnown RBP15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 IQGAP2Q13576 1575 aa15.52■□□□□ 0.08
TGFBR3-201ENST00000212355 EIF6P56537 245 aaKnown RBP15.52■□□□□ 0.07
TGFBR3-201ENST00000212355 UBXN1Q04323 297 aa15.52■□□□□ 0.07
TGFBR3-201ENST00000212355 EIF4A2Q14240 407 aaKnown RBP15.52■□□□□ 0.07
TGFBR3-201ENST00000212355 TBCAO75347 108 aaKnown RBP15.52■□□□□ 0.07
TGFBR3-201ENST00000212355 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.07
TGFBR3-201ENST00000212355 SYNCQ9H7C4 482 aa15.52■□□□□ 0.07
TGFBR3-201ENST00000212355 ATP2B3Q16720 1220 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 ZNF569Q5MCW4 686 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 MSH6P52701 1360 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 GRM8O00222 908 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 HGSO14964 777 aaPredicted RBP15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 CREB3L3Q68CJ9 461 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 G2E3Q7L622 706 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 PPP1R9BQ96SB3 815 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 CRNKL1Q9BZJ0 848 aaKnown RBP15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 ZEB2O60315 1214 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 CCDC25Q86WR0 208 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 ATRIPQ8WXE1 791 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 CALCOCO1Q9P1Z2 691 aa15.51■□□□□ 0.07
TGFBR3-201ENST00000212355 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms