RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZNF609O15014 1411 aa20.43■□□□□ 0.86
ERCC1-201ENST00000013807 CTCFP49711 727 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-201ENST00000013807 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-201ENST00000013807 TWISTNBQ3B726 338 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-201ENST00000013807 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
ERCC1-201ENST00000013807 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
ERCC1-201ENST00000013807 ZC3H12CQ9C0D7 883 aaKnown RBP20.42■□□□□ 0.86
ERCC1-201ENST00000013807 RTL9Q8NET4 1388 aa20.42■□□□□ 0.86
ERCC1-201ENST00000013807 ECE2O60344 883 aa20.41■□□□□ 0.86
ERCC1-201ENST00000013807 VIL1P09327 827 aaKnown RBP20.41■□□□□ 0.86
ERCC1-201ENST00000013807 ECE1P42892 770 aa20.41■□□□□ 0.86
ERCC1-201ENST00000013807 SAPCD2Q86UD0 394 aa20.41■□□□□ 0.86
ERCC1-201ENST00000013807 MICALL2Q8IY33 904 aa20.41■□□□□ 0.86
ERCC1-201ENST00000013807 TRPM4Q8TD43 1214 aa20.41■□□□□ 0.86
ERCC1-201ENST00000013807 ZBTB12Q9Y330 459 aaPredicted RBP20.41■□□□□ 0.86
ERCC1-201ENST00000013807 RIMBP2O15034 1052 aa20.4■□□□□ 0.86
ERCC1-201ENST00000013807 TTLL11Q8NHH1 800 aa20.4■□□□□ 0.86
ERCC1-201ENST00000013807 AIDAQ96BJ3 306 aa20.4■□□□□ 0.86
ERCC1-201ENST00000013807 KCNQ5Q9NR82 932 aa20.4■□□□□ 0.86
ERCC1-201ENST00000013807 SHTN1A0MZ66 631 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 H7C1W4 665 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 MAP2K2P36507 400 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 NEXNQ0ZGT2 675 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 CAPNS2Q96L46 248 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 GLIS2Q9BZE0 524 aaPredicted RBP20.39■□□□□ 0.85
ERCC1-201ENST00000013807 GGA1Q9UJY5 639 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 SPEF2Q9C093 1822 aa20.39■□□□□ 0.85
ERCC1-201ENST00000013807 XDHP47989 1333 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 NEURL1BA8MQ27 555 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 CTSWP56202 376 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 DOK7Q18PE1 504 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 G2E3Q7L622 706 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 ANKRD18AQ8IVF6 992 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 JARID2Q92833 1246 aaPredicted RBP20.38■□□□□ 0.85
ERCC1-201ENST00000013807 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
ERCC1-201ENST00000013807 UFL1O94874 794 aa20.37■□□□□ 0.85
ERCC1-201ENST00000013807 CELF2O95319 508 aaKnown RBP20.37■□□□□ 0.85
ERCC1-201ENST00000013807 GPR101Q96P66 508 aaPredicted RBP20.37■□□□□ 0.85
ERCC1-201ENST00000013807 CDC5LQ99459 802 aaKnown RBP20.37■□□□□ 0.85
ERCC1-201ENST00000013807 PLA2G12BQ9BX93 195 aa20.37■□□□□ 0.85
ERCC1-201ENST00000013807 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
ERCC1-201ENST00000013807 BSDC1Q9NW68 430 aaPredicted RBP20.37■□□□□ 0.85
ERCC1-201ENST00000013807 ZNF646O15015 1829 aaPredicted RBP20.37■□□□□ 0.85
ERCC1-201ENST00000013807 CWF19L2Q2TBE0 894 aaKnown RBP20.36■□□□□ 0.85
ERCC1-201ENST00000013807 CYP4F22Q6NT55 531 aa20.36■□□□□ 0.85
ERCC1-201ENST00000013807 SAMD7Q7Z3H4 446 aa20.36■□□□□ 0.85
ERCC1-201ENST00000013807 VAMP4O75379 141 aa20.35■□□□□ 0.85
ERCC1-201ENST00000013807 EGFRP00533 1210 aa20.35■□□□□ 0.85
ERCC1-201ENST00000013807 ATP2B4P23634 1241 aa20.35■□□□□ 0.85
ERCC1-201ENST00000013807 FLIIQ13045 1269 aa20.35■□□□□ 0.85
ERCC1-201ENST00000013807 PODNQ7Z5L7 613 aa20.35■□□□□ 0.85
ERCC1-201ENST00000013807 AGBL3Q8NEM8 1001 aa20.35■□□□□ 0.85
ERCC1-201ENST00000013807 FANCIQ9NVI1 1328 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
ERCC1-201ENST00000013807 ANP32CO43423 234 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 HSPA8P11142 646 aaKnown RBP20.34■□□□□ 0.85
ERCC1-201ENST00000013807 LBX1P52954 281 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 CASP7P55210 303 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 ZNF280AP59817 542 aaPredicted RBP20.34■□□□□ 0.85
ERCC1-201ENST00000013807 GCKRQ14397 625 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 GMLQ99445 158 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 GREM2Q9H772 168 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 MINPP1Q9UNW1 487 aa20.34■□□□□ 0.85
ERCC1-201ENST00000013807 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
ERCC1-201ENST00000013807 CCDC85AQ96PX6 553 aaPredicted RBP20.33■□□□□ 0.85
ERCC1-201ENST00000013807 CSF1RP07333 972 aa20.32■□□□□ 0.84
ERCC1-201ENST00000013807 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
ERCC1-201ENST00000013807 RSBN1LQ6PCB5 846 aaPredicted RBP20.32■□□□□ 0.84
ERCC1-201ENST00000013807 UBE3BQ7Z3V4 1068 aa20.32■□□□□ 0.84
ERCC1-201ENST00000013807 LINS1Q8NG48 757 aa20.32■□□□□ 0.84
ERCC1-201ENST00000013807 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
ERCC1-201ENST00000013807 KRT26Q7Z3Y9 468 aa20.31■□□□□ 0.84
ERCC1-201ENST00000013807 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
ERCC1-201ENST00000013807 G3V3G9 751 aa20.3■□□□□ 0.84
ERCC1-201ENST00000013807 KIF4BQ2VIQ3 1234 aa20.3■□□□□ 0.84
ERCC1-201ENST00000013807 DCAF8Q5TAQ9 597 aa20.3■□□□□ 0.84
ERCC1-201ENST00000013807 DCPSQ96C86 337 aaKnown RBP20.3■□□□□ 0.84
ERCC1-201ENST00000013807 MYH16Q9H6N6 1097 aa20.3■□□□□ 0.84
ERCC1-201ENST00000013807 CA12O43570 354 aa20.29■□□□□ 0.84
ERCC1-201ENST00000013807 CCT4P50991 539 aaKnown RBP20.29■□□□□ 0.84
ERCC1-201ENST00000013807 BRPF1P55201 1214 aaPredicted RBP20.29■□□□□ 0.84
ERCC1-201ENST00000013807 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
ERCC1-201ENST00000013807 PAXIP1Q6ZW49 1069 aaPredicted RBP20.29■□□□□ 0.84
ERCC1-201ENST00000013807 BEGAINQ9BUH8 593 aa20.29■□□□□ 0.84
ERCC1-201ENST00000013807 LEMD3Q9Y2U8 911 aa20.29■□□□□ 0.84
ERCC1-201ENST00000013807 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
ERCC1-201ENST00000013807 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
ERCC1-201ENST00000013807 WTIPA6NIX2 430 aaPredicted RBP20.28■□□□□ 0.84
ERCC1-201ENST00000013807 AOC2O75106 756 aa20.28■□□□□ 0.84
ERCC1-201ENST00000013807 MMP14P50281 582 aa20.28■□□□□ 0.84
ERCC1-201ENST00000013807 EXOSC9Q06265 439 aaKnown RBP20.28■□□□□ 0.84
ERCC1-201ENST00000013807 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
ERCC1-201ENST00000013807 CASP8AP2Q9UKL3 1982 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 A0A1B0GUL6 1792 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 CAPN15O75808 1086 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 USP17L8P0C7I0 530 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 NOGQ13253 232 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 RBM26Q5T8P6 1007 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms